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CAZyme Information: MGYG000003926_00479
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Rikenella microfusus | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Rikenella; Rikenella microfusus | |||||||||||
| CAZyme ID | MGYG000003926_00479 | |||||||||||
| CAZy Family | GH35 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 3742; End: 6099 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH35 | 39 | 350 | 8.1e-116 | 0.990228013029316 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam01301 | Glyco_hydro_35 | 1.09e-159 | 38 | 351 | 1 | 316 | Glycosyl hydrolases family 35. |
| PLN03059 | PLN03059 | 2.77e-49 | 16 | 604 | 14 | 721 | beta-galactosidase; Provisional |
| COG1874 | GanA | 5.80e-44 | 37 | 604 | 6 | 598 | Beta-galactosidase GanA [Carbohydrate transport and metabolism]. |
| pfam02449 | Glyco_hydro_42 | 5.41e-09 | 59 | 188 | 8 | 139 | Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. |
| pfam00754 | F5_F8_type_C | 8.61e-08 | 702 | 772 | 2 | 70 | F5/8 type C domain. This domain is also known as the discoidin (DS) domain family. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QUT50204.1 | 0.0 | 6 | 777 | 4 | 778 |
| QRO23434.1 | 0.0 | 11 | 780 | 12 | 783 |
| QUU04522.1 | 0.0 | 18 | 778 | 7 | 768 |
| QRP88535.1 | 0.0 | 18 | 778 | 7 | 768 |
| CUA20225.1 | 0.0 | 18 | 778 | 7 | 768 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6EON_A | 0.0 | 7 | 779 | 3 | 779 | GalactanaseBT0290 [Bacteroides thetaiotaomicron VPI-5482] |
| 3D3A_A | 2.95e-294 | 31 | 628 | 7 | 605 | Crystalstructure of a beta-galactosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482] |
| 4MAD_A | 1.14e-138 | 38 | 596 | 23 | 578 | ChainA, Beta-galactosidase [Niallia circulans],4MAD_B Chain B, Beta-galactosidase [Niallia circulans] |
| 4E8C_A | 2.29e-117 | 39 | 618 | 10 | 593 | Crystalstructure of streptococcal beta-galactosidase in complex with galactose [Streptococcus pneumoniae TIGR4],4E8C_B Crystal structure of streptococcal beta-galactosidase in complex with galactose [Streptococcus pneumoniae TIGR4],4E8D_A Crystal structure of streptococcal beta-galactosidase [Streptococcus pneumoniae TIGR4],4E8D_B Crystal structure of streptococcal beta-galactosidase [Streptococcus pneumoniae TIGR4] |
| 7KDV_A | 1.42e-114 | 21 | 612 | 9 | 629 | ChainA, Beta-galactosidase [Mus musculus],7KDV_C Chain C, Beta-galactosidase [Mus musculus],7KDV_E Chain E, Beta-galactosidase [Mus musculus],7KDV_G Chain G, Beta-galactosidase [Mus musculus],7KDV_I Chain I, Beta-galactosidase [Mus musculus],7KDV_K Chain K, Beta-galactosidase [Mus musculus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P48982 | 4.36e-134 | 16 | 579 | 13 | 573 | Beta-galactosidase OS=Xanthomonas manihotis OX=43353 GN=bga PE=1 SV=1 |
| Q9TRY9 | 1.48e-114 | 13 | 624 | 12 | 661 | Beta-galactosidase OS=Canis lupus familiaris OX=9615 GN=GLB1 PE=1 SV=3 |
| Q60HF6 | 1.64e-113 | 9 | 612 | 11 | 644 | Beta-galactosidase OS=Macaca fascicularis OX=9541 GN=GLB1 PE=2 SV=1 |
| P16278 | 1.53e-112 | 38 | 596 | 40 | 621 | Beta-galactosidase OS=Homo sapiens OX=9606 GN=GLB1 PE=1 SV=2 |
| P23780 | 2.64e-112 | 39 | 612 | 42 | 646 | Beta-galactosidase OS=Mus musculus OX=10090 GN=Glb1 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000572 | 0.997638 | 0.001137 | 0.000233 | 0.000208 | 0.000177 |