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CAZyme Information: MGYG000003908_01971
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Odoribacter sp900541415 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Marinifilaceae; Odoribacter; Odoribacter sp900541415 | |||||||||||
| CAZyme ID | MGYG000003908_01971 | |||||||||||
| CAZy Family | GH2 | |||||||||||
| CAZyme Description | Beta-galactosidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 8038; End: 10503 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH2 | 24 | 586 | 1e-87 | 0.5797872340425532 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3250 | LacZ | 3.05e-48 | 114 | 461 | 67 | 401 | Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]. |
| PRK10150 | PRK10150 | 2.80e-40 | 113 | 486 | 68 | 428 | beta-D-glucuronidase; Provisional |
| PRK10340 | ebgA | 2.51e-33 | 114 | 468 | 113 | 450 | cryptic beta-D-galactosidase subunit alpha; Reviewed |
| PRK09525 | lacZ | 4.05e-29 | 130 | 468 | 134 | 463 | beta-galactosidase. |
| pfam02836 | Glyco_hydro_2_C | 1.82e-18 | 350 | 608 | 4 | 290 | Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QRP57072.1 | 0.0 | 9 | 818 | 8 | 814 |
| ASM65767.1 | 0.0 | 9 | 818 | 8 | 814 |
| QQT77684.1 | 0.0 | 9 | 818 | 8 | 814 |
| QUU07685.1 | 0.0 | 9 | 818 | 8 | 814 |
| QRO23432.1 | 0.0 | 22 | 821 | 19 | 817 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5EUV_A | 1.78e-69 | 89 | 807 | 27 | 716 | ChainA, Beta-D-galactosidase [Paracoccus sp. 32d],5EUV_B Chain B, Beta-D-galactosidase [Paracoccus sp. 32d],5LDR_B Chain B, Beta-D-galactosidase [Paracoccus sp. 32d] |
| 5LDR_A | 1.81e-69 | 89 | 807 | 28 | 717 | ChainA, Beta-D-galactosidase [Paracoccus sp. 32d] |
| 5UJ6_A | 2.20e-54 | 86 | 670 | 52 | 660 | CrystalStructure of Bacteroides Uniformis beta-glucuronidase [Bacteroides uniformis str. 3978 T3 ii],5UJ6_B Crystal Structure of Bacteroides Uniformis beta-glucuronidase [Bacteroides uniformis str. 3978 T3 ii],6NZG_A Bacteroides uniformis beta-glucuronidase 2 covalently bound to cyclophellitol-6-carboxylate aziridine [Bacteroides uniformis],6NZG_B Bacteroides uniformis beta-glucuronidase 2 covalently bound to cyclophellitol-6-carboxylate aziridine [Bacteroides uniformis] |
| 6D50_A | 2.34e-54 | 86 | 670 | 60 | 668 | Bacteroidesuniforms beta-glucuronidase 2 bound to D-glucaro-1,5-lactone [Bacteroides uniformis str. 3978 T3 ii],6D50_B Bacteroides uniforms beta-glucuronidase 2 bound to D-glucaro-1,5-lactone [Bacteroides uniformis str. 3978 T3 ii] |
| 6HPD_A | 1.41e-53 | 88 | 778 | 64 | 748 | Thestructure of a beta-glucuronidase from glycoside hydrolase family 2 [Formosa agariphila KMM 3901] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P77989 | 2.13e-90 | 69 | 797 | 13 | 712 | Beta-galactosidase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=lacZ PE=3 SV=2 |
| P26257 | 5.63e-65 | 88 | 789 | 30 | 715 | Beta-galactosidase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=lacZ PE=1 SV=1 |
| T2KN75 | 7.40e-53 | 88 | 778 | 55 | 739 | Beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22060 PE=1 SV=1 |
| T2KPJ7 | 1.15e-52 | 83 | 670 | 74 | 678 | Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_21970 PE=2 SV=1 |
| T2KM09 | 3.23e-45 | 83 | 775 | 70 | 758 | Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22050 PE=2 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000231 | 0.999177 | 0.000153 | 0.000141 | 0.000138 | 0.000128 |