CAZyme Information: MGYG000003804_00769

Basic Information

• Species: Epilithonimonas bovis
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Flavobacteriales; Weeksellaceae; Epilithonimonas; Epilithonimonas bovis
• CAZyme ID: MGYG000003804_00769
• CAZy Family: CBM50
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
668		72327.31	9.2703

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003804	1849488	MAG	Canada	North America

• Gene Location: Start: 973; End: 2979 Strand: -

Full Sequence      

MVKKIFILSALISFLGLSAQNTHTVAQKETPYGISRQYGLTVDELYRLNPSKKDGNLKIG
DVLIVSKNGSGPVKTAAPVVATSAPKTGKTGTIALLPKQTIYGITKQYHISEADLRKLNP
ELDSHLKIGDLVTLPADNIQKYAGSASPAPAQTVVTQTVTEKPAEVKPAVKTETKTETST
DNSLYVVQAKDNYYKISRQFNLTQKQLFALNPGLESSGLKPGEAIRVAGTASSAPVQSSG
AIQVEDNSQSNNASAPITKTTAAVSNNAVASGSASADDYVTYTVQSGDTMFSIMNRFNVT
LDQLISLNPNLSDGLKAGMTLKIKKQDPMYSKKSGDVLSVVLMLPFGFDANDAKYRTMAM
DFLTGAKLAAERNAANGQKLDIKVVDAGNENTFKNSLSQINQDNTDLIVGPFFKSSVLEV
LNYVNDKKIPVVAPFANSSDLFDYNNLIIVETESSVYSDRIVKEVGQVYQDQKIYIVADS
SKANANAIKDGLEKSLSKPNIVIVNSSSDIKLDTNMMTGQAVPVIAVLADDDESAGAAFA
SKMVALGKQADGSKAFSMFYSPSFEKNVDDLSKVSLVYLMDRKIDYEGSFEKEVLASYKA
KYCKTPSKYAVIGFDVMNDMLTRENKKGEIFKQIGKSQTQLATKFEFVKAKPNGAYINNG
YRVVRLMQ

Enzyme Prediction     

No EC number prediction in MGYG000003804_00769.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK06347	PRK06347	5.64e-11	18	324	328	592	1,4-beta-N-acetylmuramoylhydrolase.
cd00118	LysM	5.77e-11	22	65	2	45	Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
smart00257	LysM	9.65e-11	281	323	1	44	Lysin motif.
cd00118	LysM	1.06e-10	280	323	1	45	Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
cd06268	PBP1_ABC_transporter_LIVBP-like	1.12e-09	361	633	18	298	periplasmic binding domain of ATP-binding cassette transporter-like systems that belong to the type 1 periplasmic binding fold protein superfamily. Periplasmic binding domain of ATP-binding cassette transporter-like systems that belong to the type 1 periplasmic binding fold protein superfamily. They are mostly present in archaea and eubacteria, and are primarily involved in scavenging solutes from the environment. ABC-type transporters couple ATP hydrolysis with the uptake and efflux of a wide range of substrates across bacterial membranes, including amino acids, peptides, lipids and sterols, and various drugs. These systems are comprised of transmembrane domains, nucleotide binding domains, and in most bacterial uptake systems, periplasmic binding proteins (PBPs) which transfer the ligand to the extracellular gate of the transmembrane domains. These PBPs bind their substrates selectively and with high affinity. Members of this group include ABC-type Leucine-Isoleucine-Valine-Binding Proteins (LIVBP), which are homologous to the aliphatic amidase transcriptional repressor, AmiC, of Pseudomonas aeruginosa. The uncharacterized periplasmic components of various ABC-type transport systems are included in this group.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QIY84226.1	0.0	1	668	1	668
AZI39040.1	0.0	1	668	1	667
AZI55893.1	0.0	1	668	1	667
QIG90193.1	2.11e-281	1	667	1	645
ALR31813.1	6.77e-278	1	667	1	646

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.001216	0.941046	0.056922	0.000273	0.000273	0.000261

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003804_00769.