CAZyme Information: MGYG000003734_04873

Basic Information

• Species: Afipia broomeae
• Lineage: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Afipia; Afipia broomeae
• CAZyme ID: MGYG000003734_04873
• CAZy Family: GT0
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
571	MGYG000003734_165|CGC1	63992.48	10.5941

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003734	5238503	MAG	Canada	North America

• Gene Location: Start: 3722; End: 5437 Strand: -

Full Sequence      

MSDASSTETGRRTGKNPGPRTGLRSRQKARLRHVPVTRRVAAWIAAVAHDPATSLRFVIG
FAVVHALLWTIILTALKAAQDVHMDVAEAYAWGQKFLLGYGKHPPLAGWVAGVWFRIFPV
TDWATYALAMTVASTGLVICWLIAVRVVDHRRAMFTVAMLALYPVFTFKGFKYNPDLLQL
VTLPLFVLAYLEAFQKRTVMSGIWLGLAAALALMTKYWVLTMIGAAGLASLLHPDRMRFW
RSPAPWVAFAACFAGLLPHLWWLKQADFLPLIYADDVYGGRTFGTTLRLASIYLAHNLGL
LLLPVSFAAIALAWKLQWWRSLRRRGFIGEFIASARRPWVRGPNSGVFLTQARNIWIMQI
IVALVPPIAAVAFGIYMKTDWGISLFFLVPLALIALPTLRVTQMALIRLMLMWLVFTLVM
LLISPIIAAQTVRRDGDAGVPFAPKSEFAMQLTEAWRARFNRRWAVVAGTTEIGEPLTFY
SPDHPAPLTPREVWASGLTSLEEAKQRGFIGICDTKDLELNKCEAWMAENAPNAERLDLT
SRRYFHGKAGPAVKWKIWIVGPERPDEEDDK

Enzyme Prediction     

No EC number prediction in MGYG000003734_04873.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam13231	PMT_2	1.19e-21	102	262	1	160	Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366.
COG1807	ArnT	1.15e-08	83	493	44	443	4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family [Cell wall/membrane/envelope biogenesis].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BCE26039.1	5.30e-212	39	564	5	525
AEA81375.1	6.98e-15	65	351	14	292
ABR91058.1	8.70e-12	58	313	28	281
SMF71503.1	1.68e-11	61	302	15	260
ABE40280.1	1.29e-10	49	277	143	369

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q1MLH5	2.13e-14	50	325	2	265	Lipid A galacturonosyltransferase RgtD OS=Rhizobium leguminosarum bv. viciae (strain 3841) OX=216596 GN=rgtD PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.999973	0.000055	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

start	end
57	76
96	118
123	145
177	194
209	231
244	263
292	314
355	377
381	399
406	428