CAZyme Information: MGYG000003730_01032

Basic Information

• Species: Bifidobacterium vaginale_E
• Lineage: Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium vaginale_E
• CAZyme ID: MGYG000003730_01032
• CAZy Family: GT51
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
444		47281.1	6.1843

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003730	1377855	MAG	Canada	North America

• Gene Location: Start: 11; End: 1345 Strand: +

Full Sequence      

MVRDELTSNGAFSQEDLDSGGYRIITTIDKSKQDLMFNVASPSQGGRGIVPQGLQIGGIS
VNAKDGSIISVYAGDDYLTKQLNNATQALYEPGSTMKPFALIGAIQAGTSLDTMFNGNSP
RKFDGIEKPVGNFANASYGMINLYKATADSVNTVYMDLQSKLGAKKVAHTAVTAGLSPKR
VNGKNPFTVLGNDSVHVSEIARAYATFANQGRRPDLHIVASVKNPDGKEFYRAPTVGKQV
FSPTDAALATKAMVGVVQHGTATEARSIGRPVAGKSGTANDETAGSFVGFTPNIVTAFAI
WNPDANGSPQVIKPFHGYLGGSDYPVHLFTRYMRQAVAGTPVAKFPEVKDTGKIGGPDGT
WGLGDRHAYTHDEDEEDKNKDKDKDKDKDKDDLDPDHINRSDNPWDSYTNSGNYGNSYSG
SYGNSESGNTGESQSDASTPHSGQ

Enzyme Prediction     

No EC number prediction in MGYG000003730_01032.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
TIGR02074	PBP_1a_fam	1.74e-62	1	339	204	531	penicillin-binding protein, 1A family. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
COG0744	MrcB	2.61e-58	1	347	278	607	Membrane carboxypeptidase (penicillin-binding protein) [Cell wall/membrane/envelope biogenesis].
COG5009	MrcA	1.15e-38	59	345	424	727	Membrane carboxypeptidase/penicillin-binding protein [Cell wall/membrane/envelope biogenesis].
COG0768	FtsI	1.52e-31	21	311	238	576	Cell division protein FtsI/penicillin-binding protein 2 [Cell cycle control, cell division, chromosome partitioning, Cell wall/membrane/envelope biogenesis].
pfam00905	Transpeptidase	6.95e-28	61	308	6	277	Penicillin binding protein transpeptidase domain. The active site serine is conserved in all members of this family.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
APW19246.1	2.62e-241	1	371	341	711
ADB14567.1	2.62e-241	1	371	341	711
ADP38347.1	2.42e-197	1	364	324	687
SDR91728.1	2.17e-196	1	364	324	687
AEF31192.1	2.17e-196	1	364	324	687

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3ZG8_B	6.91e-29	2	301	122	429	CrystalStructure of Penicillin Binding Protein 4 from Listeria monocytogenes in the Ampicillin bound form [Listeria monocytogenes],3ZG9_B Crystal Structure of Penicillin-Binding Protein 4 from Listeria monocytogenes in the Cefuroxime bound form [Listeria monocytogenes],3ZGA_B Crystal Structure of Penicillin-Binding Protein 4 from Listeria monocytogenes in the Carbenicillin bound form [Listeria monocytogenes]
3ZG7_B	1.20e-26	2	301	122	429	CrystalStructure of Penicillin-Binding Protein 4 from Listeria monocytogenes in the apo form [Listeria monocytogenes]
3UDF_A	1.41e-16	59	343	391	722	ChainA, Penicillin-binding protein 1a [Acinetobacter baumannii],3UDF_B Chain B, Penicillin-binding protein 1a [Acinetobacter baumannii],3UDI_A Chain A, Penicillin-binding protein 1a [Acinetobacter baumannii],3UDI_B Chain B, Penicillin-binding protein 1a [Acinetobacter baumannii],3UDX_A Chain A, Penicillin-binding protein 1a [Acinetobacter baumannii],3UDX_B Chain B, Penicillin-binding protein 1a [Acinetobacter baumannii],3UE0_A Chain A, Penicillin-binding protein 1a [Acinetobacter baumannii],3UE0_B Chain B, Penicillin-binding protein 1a [Acinetobacter baumannii],3UE1_A Chain A, Penicillin-binding protein 1a [Acinetobacter baumannii],3UE1_B Chain B, Penicillin-binding protein 1a [Acinetobacter baumannii]
4OON_A	5.79e-14	59	347	399	733	Crystalstructure of PBP1a in complex with compound 17 ((4Z,8S,11E,14S)-5-(2-amino-1,3-thiazol-4-yl)-14-(5,6-dihydroxy-1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)-8-formyl-2-methyl-6-oxo-3,10-dioxa-4,7,11-triazatetradeca-4,11-diene-2,12,14-tricarboxylic acid) [Pseudomonas aeruginosa PAO1]
4MNR_A	8.44e-14	82	292	173	419	CrystalStructure of D,D-Transpeptidase Domain of Peptidoglycan Glycosyltransferase from Eggerthella lenta [Eggerthella lenta DSM 2243]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
O86088	3.16e-24	43	339	408	708	Penicillin-binding protein 1A OS=Neisseria cinerea OX=483 GN=mrcA PE=3 SV=1
O87579	7.60e-24	43	341	408	710	Penicillin-binding protein 1A OS=Neisseria lactamica OX=486 GN=mrcA PE=3 SV=1
Q5FAC7	3.27e-23	43	339	408	708	Penicillin-binding protein 1A OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) OX=242231 GN=mrcA PE=3 SV=3
O05131	3.27e-23	43	339	408	708	Penicillin-binding protein 1A OS=Neisseria gonorrhoeae OX=485 GN=mrcA PE=1 SV=3
O87626	4.38e-23	59	347	425	717	Penicillin-binding protein 1A OS=Neisseria flavescens OX=484 GN=mrcA PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000070	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003730_01032.