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CAZyme Information: MGYG000003687_01449
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Paenibacillus polymyxa | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus; Paenibacillus polymyxa | |||||||||||
| CAZyme ID | MGYG000003687_01449 | |||||||||||
| CAZy Family | GT2 | |||||||||||
| CAZyme Description | D-alanine--poly(phosphoribitol) ligase subunit 1 | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 262845; End: 278546 Strand: - | |||||||||||
Full Sequence Download help
| MRNALIQNIY PLTPMQEGLL YHSILDEHSE AYFDQTVITI NERLNAETLK ESFQTLIDRY | 60 |
| DVLRTVFVYK ETDQPLQVVL ANKEATIDYR DITELNEAEQ RLYVDNFTIN DRKMRFDLEK | 120 |
| DLLIRISVLA LSDTSCKMVL SFHHIIMDGW CIGTIAKDLF QIYRAYSIKQ KPELDAVFPY | 180 |
| SRYISWLGQQ NKKTALAYWE QQLSGVEEQS GLPLSSKSTE DGSYKLNNHI FTLDEQLTRS | 240 |
| LEMIAQQNQV TLSSVFHGIW GLLLQRYNDT KDVVFGSVVS GRPAELEGSE KMVGLFINTI | 300 |
| PVRICHKEAQ TFSQIIKQFQ QNMMESGKYH FLSLADIQML TPLGKSLIHH IIAFENYPIT | 360 |
| EELAGGEGEQ LVSIVETEGF EQTNYDFNIG VIPGKELKVK FGYNSIAYQA SDIQRIELHL | 420 |
| KQIAEQVVSN PHMDVDDIDL LSGEEKHRIL RDFNDTNALY PQSQTIQQLF EEQAALTPNR | 480 |
| LAAAFADGRL TYLELNERAN RLARVLRMKG VQTGQIVGIA AYRSPEMLVG IMAILKAGGA | 540 |
| YLPINPEDPL ERIQYIAGNS GASILLVQQE IQSTLKDLSQ NISVLAIGAD WATEKTNLEP | 600 |
| YSGPEDVAYV IYTSGSTGKP KGVMIRHTSI VNRLHWMQKK YPIGVDDTIL QKTPYTFDVS | 660 |
| VWELFWWAIA GASVYFLPPD GEKDPKLLVN TVAEQKITTL HFVPSMLSVF LEYVEQHQAE | 720 |
| GKLSSIKRVF ASGEALTVKQ ARRFNTLLRK PNGTTLHNLY GPTEATVDAT WFDCPDGDDL | 780 |
| QSIPIGKPID NNRLYILDQE GRLLPVGIPG ELYIAGTGVA QGYINQPDLT DERFTDSPFV | 840 |
| IGERMYKTGD LAKWLPDGNV EYLGRTDHQV KIRGYRIETG EIEKVLLSHH DIREAVVLSR | 900 |
| KDQEDETYLC AYIVSDRELL TQEIRSYLKA SLPLYMVPAH LIQIAAIPLT NNGKVNRGAL | 960 |
| PEPHHVIREQ GFVAPRTDTE TRLVRLWEDI LHVSPIGVHS HFFELGGHSL KATILIGKII | 1020 |
| REFQVELPMR EIFEYPTVES MSKLIERTIG RGAGTFTEIA LLSGQAYYPV SSSQRRQMIL | 1080 |
| HQLEGAELVY NMPSVMLVQG HLDQERLKMA FTTLIHRHEA LRTSFSWING EPVQSVHDEV | 1140 |
| EFELKIHSLT SKEDLEEQQI ETVLSEFVQP FDLSRAPLLR GELIPLTENQ NMLLVDLHHI | 1200 |
| ISDGVSMSII MDEFVKAYDG QALPPLSVQY KDYANWHNEQ INHGFIKEQE SYWLDLFKHE | 1260 |
| PPVLELPTDF PRPSIQSYEG NTVSRILGDD ITEPLHKLAA ETQSTLFMIL LAVYNVVLSK | 1320 |
| HARQDDIVIG TPVAGRRHPD TEKIVGMFVN TLALRTSPSA EKSLSAFLDE VKETVLSAFE | 1380 |
| HQEYPFEQLV EKLALRRDVS RSPIFDTMFV MQNTKGQPLQ SSGLEFKPFP FNPGVSRFDL | 1440 |
| TLSAEETGSY LHLNLEYNSA LFQKDTVERF LDHMVVVLRS FVAHSTQTIG DTDLLTTVEK | 1500 |
| EVILKKFNGT AAPYPREKTI HQLFEEQVER TPEHPAALYQ DRQLTYRELN TQANRVAHVL | 1560 |
| RKKGIGPDQM VGIAVHRSLE MIVGLLGILK AGGAYLPLHP EDPEERLGFM LEDSGASILL | 1620 |
| TQRDQLDRLR PHEADRELIA IEDLLMEGME LTGEECEKNP EPVNRSSDLV YVIYTSGSTG | 1680 |
| KPKGVMIEHA SLINRLHWME QRIPFGAEDV ILQKTPYTFD VSLWELFSWA IQGATVCFLE | 1740 |
| PGGEKDPATI AETVEANGVT AIHFVPSMLG AFLEYIEHSG AAGKMRSVRR VFASGEALMT | 1800 |
| EHVRRFNRLL GTEGATLHNL YGPTEATVEV AYYDCPADQE PESIPIGKPI DNVKLYILDH | 1860 |
| KDRLQPIGVP GELHIGGDCV ARGYVNRKEL TEEKFVADPY AAGGRMYRTG DLARWLPDGN | 1920 |
| IEYMGRIDHQ VKIRGYRIEL GEIEAALLAY EGIKAATVLA LDDRDGGKYL CAYFESGEGL | 1980 |
| NTSILRAHLK ALIPDYMVPS HFVRLDVMPH LSSGKVNRKA LPEPDHGMRA TSYVAPRNET | 2040 |
| ERKLAEIWEK LLDISSIGIH DNFFELGGHS LTATRLMSRI NKLLQVEIPL RNIFAHPTIE | 2100 |
| EMSVLICGPE VAVGTMMDIA PSELRDSYPV TSVQKRQMIL HQFEGAETAY NMPFALLMEG | 2160 |
| ELDIQRLERV FRDLIDRHEA LRTSFEWGTE EPVQKIHSEV PFQLSLQQAD DIGIEAQDKQ | 2220 |
| IQAIFKTFVR PFNLGQAPLL RAKLVRISDN RHILMVDMHH IVADGVSMSV LANDFTTLYH | 2280 |
| GNSLPPLRIQ YKDYAVWNSE WIKEGHLIKQ EQYWLDLFSD ELPVLNLPTD FTRPQVQSFE | 2340 |
| GDRYSFQADK TLREGLQQFV AENRTTLFMV LLSAYNVLLH KYSGQEDIVV GSPIAGRNHT | 2400 |
| DLENIMGMFV NTLVLRNRPA ADKTLKQFLL EVQSSSLEAF EHQDYPIEDL VDKLELHRDL | 2460 |
| SRNPLFDTMF SLENTDSVSL LTDGISISPY SVEAGIAKVD LTLTAEADQE GLSFRIDYCN | 2520 |
| KLFYKESIER MSKHYLQILQ TIVDSADARI GDVNMVTVSE EEILLTKFNT VPASNEKENR | 2580 |
| KLLHQLFEEQ VAKTPERVAV SFEEQQWTYS ELNDKANQLA RVLREKGVQA NTLVGMMVER | 2640 |
| SFEMIVGILG ILKAGGAYVP LAPDYPAERI SLMLYDCKIT LLLASHHVLT ESTFIKEAGA | 2700 |
| DAFAGEILDL DQLDTIVKDL DSSNLPYVNE PDDLAYVLYT SGSTGKPKGN LTMHYNVERL | 2760 |
| IKNSNYIDLT EQDILLQLSN YAFDGSVFDI FGALVNGSKL VLLRKENMLN PEKLSSLIRN | 2820 |
| ENVSVFFITT ALFNTLIETN IECFTTIRKI LFGGERVSLP HVSKLFEHIG PHKMLHMYGP | 2880 |
| TESTVFATCY GVDQIHERKG TIPIGAPITG TTVYILDKNL KLQPIGIPGE LCIAGDALSQ | 2940 |
| GYLNLPDFTN EKFIDNPFNP GEKMYKTGDI AKWLPDGNIE FVGRQDHLVK IRGFRIELGE | 3000 |
| IENRLLSHER IKEAIVVAKP DPSGQNRISA YMVTDGELNT SAIRRYLAKY LPDYMLPSSL | 3060 |
| ILLDSLPLNA NGKVDQKKLP EPHINLDLST LYEPPTSPTE EKLVKIWEGV LGQEGIGISH | 3120 |
| SFFDLGGDSI KAIQVIARLS QEGLKLDMKD IFQHPTVQQV APYVQRRTRI IDQKAVTGEV | 3180 |
| QLTPIQRWFF ENVQDDRNHF NQAVMLFTSG VFDEEALKTA LENIIIHHDA LRMAYEIGQS | 3240 |
| SVCQYHTETQ LRPFHLNIYN LQGNNDAESK IEEEASRLQA TMDLRAGEMI RVGLFQTDQG | 3300 |
| QHLLIAIHHL VIDGVSWRIL LEDLESAYTQ ALQGEDIALP DKTDSFQYWS DRLAEYSNSR | 3360 |
| TLLKEKAYWQ QIEGVQCESP FPQKSTVTDE GGVKKERTSI AVRLDKQDTQ LLLGTAHQAY | 3420 |
| NTEINDLLLS ALGLAIKQWA GSKIFAINLE GHGREEIMEE IDVTRTIGWF TSMFPIVLDM | 3480 |
| RDSEDISSVI RRTKEMIRHI PNRGIGYGVL KYLTDVEHTQ DLDFNIQPQI SFNYLGQFMD | 3540 |
| GTQEGSFESS PLSPGRSVGE GAESHFTLDI NSIVSQDQLL LEFGYIRGEH ADHAIEQLSL | 3600 |
| MYIEHLKMLI NHCTSISQKV LTPSDYQDHT LSIPELDQIL KQFGGTEQVE HIYSLTPMQQ | 3660 |
| GMLFHYMMEP ETTAYVEQVA IEMEGELQQE LLEQSFQELL AKYEVLRTNF VFTSIREPRQ | 3720 |
| VVRKHQHAEF QFYDLTGMDE QEITAYLEDH KKQDLLRGFD LSNEALIRIN VLKTTPDKFL | 3780 |
| MMWTFHHMIM DGWCVGIVYH DFMSMYLDLK NGRPLKSETA PAYSTYIRWL EKQDKGESMQ | 3840 |
| YWKQALDGYA QCAVIPKTFK LQAKEGGYRT SQLEFSLDQT MTRRLTEIAS HNRITVNTLF | 3900 |
| QSIWGALLQR YNNTNDVVFG AVVSGRPPVI PDIESMVGIF INTIPVRIYG EENESFIEMA | 3960 |
| KRAQQSSIES VKYEYTSLAD IQSVTTLKQS LLDHIIVFEN YPEYGEEEAL QKHNLKIHVR | 4020 |
| DMAFYEQTNY DFNLIVSLKD ELNIKFLYNA DTLSREFVER IKNHLNGVVR QIVDNPEMSI | 4080 |
| SSIEVTSLPE KEVILNEFNN TTAIYPRAKT IHQLFEEQVG RTPEHPAALY KGRQLTYREL | 4140 |
| NAQANRLAHV LREKGVGPDR VVGIAVHRSL EMIIGLLGIL KAGGAYLPLN PEDPEERLAF | 4200 |
| MLEDSGASIL LTQQELVEQL RCHGTTRELI AIEDLLVQEK EQTEREKNPE SINRSTDLVY | 4260 |
| VIYTSGSTGK PKGVMIEHAS LINRLHWMQK RIPFGAEDVI LQKTPYTFDV SLWELFSWAI | 4320 |
| QGATVCFLEP GGEKDPATIA ETVESNRVTA LHFVPSMLGA FLEYMEHSGA AGKMRSVRRV | 4380 |
| FASGEALMTE HVRRFNCLIG GGGATLHNLY GPTEATVEVA YYDCPVEHEP ESIPIGKPID | 4440 |
| NVKLYILDKK DRLQPIGIPG ELHIGGDCVA RGYVNREELT EEKFVEDPYE PGGRMYRTGD | 4500 |
| LARWLPDGNI EYMGRIDHQV KIRGYRIELG EIEAALLAHD GVRAAAVLAR ADDRTGMPSL | 4560 |
| GAYVVAEPHV TTAMLRQNLS VSVPEYMIPA YFVFLDQMPL TSSGKINRRM LLEIELEFGT | 4620 |
| GTEYVEPSSE LEKELVEIWM SVLGIEHVGI DDNFFELGGH SLTAIQLASR LQGIWSSELR | 4680 |
| LSSIYQYPTV RELALHVEGM EENHSALAQQ FDQIIALLHQ KLNVKGWLQQ EQFNGKSYIV | 4740 |
| LHLEDGAISF EKEIMELLDM KCDESIQPHY ITWHGEETLR LEEANLEDIK SIWTERIDND | 4800 |
| LDVFSKAILS LGVIERLPVS PTQRYHLQHS DISGTIIPLE KHMNMEYVEE AIRQIIREQD | 4860 |
| LMRSTLCEEN GELQWQVREA PDHLPVPLVD ISMYDEDTQQ VILNNIVWPY FYRQHELSNS | 4920 |
| LLYRILIVKK NLKDYMLILP FSHSIFDFMS SEIIKHQFNT YYECVRAGKE TPKGSRNRYS | 4980 |
| DFTAHIMEGP QGVDDLELAT TYNLDKFDRA IGRITDFVSQ KAVLEGHTTV IWDLKSSERA | 5040 |
| VHLDNTSHWE VAFFTFTAFC KMYFELSQVP IWVTQYGRSF GEKRYYDVIG EFVDHIPILT | 5100 |
| NLDQNLVSLE QQVRQSVQWA AEHNISFANL MYNPDVQNDY PLSGGYLQQA LDRMPIVFNF | 5160 |
| LGELRSEHQL LQTVDLGNVN VEGRTRILCE VWHDSESNLF VALTLPFSED ESIVRNHLQS | 5220 |
| ALEQLERRWA TVL | 5233 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd17655 | A_NRPS_Bac | 0.0 | 4113 | 4613 | 1 | 488 | bacitracin synthetase and related proteins. This family of the adenylation (A) domain of nonribosomal peptide synthases (NRPS) includes bacitracin synthetases 1, 2, and 3 (BA1, also known as ATP-dependent cysteine adenylase or cysteine activase, BA2, also known as ATP-dependent lysine adenylase or lysine activase, and BA3, also known as ATP-dependent isoleucine adenylase or isoleucine activase) in Bacilli. Bacitracin is a mixture of related cyclic peptides used as a polypeptide antibiotic. This family also includes gramicidin synthetase 1 involved in synthesis of the cyclic peptide antibiotic gramicidin S via activation of phenylalanine. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions. |
| cd17655 | A_NRPS_Bac | 0.0 | 468 | 963 | 1 | 489 | bacitracin synthetase and related proteins. This family of the adenylation (A) domain of nonribosomal peptide synthases (NRPS) includes bacitracin synthetases 1, 2, and 3 (BA1, also known as ATP-dependent cysteine adenylase or cysteine activase, BA2, also known as ATP-dependent lysine adenylase or lysine activase, and BA3, also known as ATP-dependent isoleucine adenylase or isoleucine activase) in Bacilli. Bacitracin is a mixture of related cyclic peptides used as a polypeptide antibiotic. This family also includes gramicidin synthetase 1 involved in synthesis of the cyclic peptide antibiotic gramicidin S via activation of phenylalanine. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions. |
| cd17655 | A_NRPS_Bac | 0.0 | 1522 | 2025 | 1 | 490 | bacitracin synthetase and related proteins. This family of the adenylation (A) domain of nonribosomal peptide synthases (NRPS) includes bacitracin synthetases 1, 2, and 3 (BA1, also known as ATP-dependent cysteine adenylase or cysteine activase, BA2, also known as ATP-dependent lysine adenylase or lysine activase, and BA3, also known as ATP-dependent isoleucine adenylase or isoleucine activase) in Bacilli. Bacitracin is a mixture of related cyclic peptides used as a polypeptide antibiotic. This family also includes gramicidin synthetase 1 involved in synthesis of the cyclic peptide antibiotic gramicidin S via activation of phenylalanine. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions. |
| cd17646 | A_NRPS_AB3403-like | 0.0 | 4112 | 4611 | 1 | 488 | Peptide Synthetase. The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester bond to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions. |
| cd17655 | A_NRPS_Bac | 0.0 | 2585 | 3082 | 1 | 489 | bacitracin synthetase and related proteins. This family of the adenylation (A) domain of nonribosomal peptide synthases (NRPS) includes bacitracin synthetases 1, 2, and 3 (BA1, also known as ATP-dependent cysteine adenylase or cysteine activase, BA2, also known as ATP-dependent lysine adenylase or lysine activase, and BA3, also known as ATP-dependent isoleucine adenylase or isoleucine activase) in Bacilli. Bacitracin is a mixture of related cyclic peptides used as a polypeptide antibiotic. This family also includes gramicidin synthetase 1 involved in synthesis of the cyclic peptide antibiotic gramicidin S via activation of phenylalanine. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QND46664.1 | 0.0 | 542 | 3183 | 1 | 2679 |
| BAY90071.1 | 8.24e-304 | 193 | 3161 | 312 | 3280 |
| BAZ00088.1 | 1.39e-301 | 180 | 3161 | 300 | 3289 |
| BAZ75991.1 | 1.39e-301 | 180 | 3161 | 300 | 3289 |
| BAY30132.1 | 1.09e-300 | 180 | 3161 | 300 | 3291 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6MFY_A | 0.0 | 461 | 2030 | 202 | 1721 | Crystalstructure of a 5-domain construct of LgrA in the substrate donation state [Brevibacillus parabrevis],6MG0_A Crystal structure of a 5-domain construct of LgrA in the thiolation state [Brevibacillus parabrevis],6MG0_B Crystal structure of a 5-domain construct of LgrA in the thiolation state [Brevibacillus parabrevis] |
| 6MFZ_A | 0.0 | 461 | 2113 | 202 | 1804 | Crystalstructure of dimodular LgrA in a condensation state [Brevibacillus parabrevis],6MFZ_B Crystal structure of dimodular LgrA in a condensation state [Brevibacillus parabrevis] |
| 2VSQ_A | 3.51e-227 | 3640 | 4699 | 1 | 1041 | Structureof surfactin A synthetase C (SrfA-C), a nonribosomal peptide synthetase termination module [Bacillus subtilis] |
| 6P1J_A | 3.03e-225 | 1068 | 2021 | 6 | 964 | Thestructure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo2 serine module [Eleftheria terrae],6P1J_B The structure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo2 serine module [Eleftheria terrae] |
| 6OYF_A | 1.90e-205 | 1069 | 1935 | 4 | 873 | Thestructure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo1 serine module [Eleftheria terrae],6OZV_A The structure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo1 serine module in complex with AMP [Eleftheria terrae],6P4U_A The structure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo1 serine module in complex with Mg and AMP [Eleftheria terrae] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P39846 | 0.0 | 1065 | 3640 | 8 | 2554 | Plipastatin synthase subunit B OS=Bacillus subtilis (strain 168) OX=224308 GN=ppsB PE=1 SV=1 |
| Q04747 | 0.0 | 6 | 3639 | 6 | 3574 | Surfactin synthase subunit 2 OS=Bacillus subtilis (strain 168) OX=224308 GN=srfAB PE=1 SV=3 |
| P94459 | 0.0 | 6 | 3639 | 7 | 3596 | Plipastatin synthase subunit D OS=Bacillus subtilis (strain 168) OX=224308 GN=ppsD PE=1 SV=2 |
| P39847 | 0.0 | 1065 | 3639 | 8 | 2548 | Plipastatin synthase subunit C OS=Bacillus subtilis (strain 168) OX=224308 GN=ppsC PE=1 SV=2 |
| Q70LM4 | 0.0 | 1065 | 4705 | 5 | 3623 | Linear gramicidin synthase subunit D OS=Brevibacillus parabrevis OX=54914 GN=lgrD PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000049 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |