CAZyme Information: MGYG000003687_01235

Basic Information

• Species: Paenibacillus polymyxa
• Lineage: Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus; Paenibacillus polymyxa
• CAZyme ID: MGYG000003687_01235
• CAZy Family: GT2
• CAZyme Description: Gramicidin S synthase 2

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1289	MGYG000003687_4|CGC1	146709.43	5.0514

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003687	5656034	Isolate	China	Asia

• Gene Location: Start: 6362; End: 10231 Strand: -

Full Sequence      

MHYEGYETSSAQKRLYLIDDLLGPNIIYNMPSIRMIKGPLKQERLYRAWCRLTERHEGLR
TSFLQKDGEVLQLVHESIDVSIPYREHSGQSTDKLVNEFIRPFSLHEVPLWRAELVPLAD
EELLFLFDIHHIIADAVTINIIFEELMALYHGQELAPLEFQYVDYTIWQNDQLSDIHIQK
QGEFWLNQFTEDVPLLSLPTDGKGLRSDYSGGVVPFSIKADTAHSLRALCLQHNVTLYMV
LLAAYSILLSKYAGQEDLVIGTPVAGRTHSEFEGIVGMFVNTLALRQKPLGSKQFSAFLE
EVADRTFAAFDHQDYPFDMLVEQVNPERISGRNPLFDACFVLENVPQPVVPATEVTFSPY
SFEHKISKFDITLYAYEMQEGIGLELEYRKALFKEESASRMLRHFARIVEIIGEQPDIRI
EDIDMVTEEERTVLLHTFNQTSSKNAYEKKLHGVPIHRLFEQQVIRTPDHPAVNWKEKQL
TYEELNERANQLARVLRQKGVQAEDVVGILATPALEMIVGILAILKAGAAYLPIDPLYPD
ERIQYLLQDSQAKICLLPTASTRRFPQAETLLLTDPSLYTGESCNLEDNNQARNVMYIIY
TSGSTGQPKGVMIEHQSFARLVLEPGPLKITPEDRILQTCSLAFDVSVYELWGTLLSGAT
LYLIEKEELLSADILGMRMAQYQITMAWFTAPLLNQLIDDKPSIFTGLRLIMTGGDALSP
QHMKLLRAAQPDLTIVNAYGPSENTIFTSFHTIQEDYDHNVPIGKPVANTQVYILNASNQ
LQPIGVPGELCIGGEGLARGYLAREELTAAKFVTHPWLPEERMYRSGDCARWLADGTLEF
LGRMDHQVKIRGFRIETGEIEARLALIEGIQEAVVLVRQHNDGIKYLCAYFVSDVEMSQA
EVRLELATYLPDYMIPACLIRLPRLPLNVNGKVDRNALPEPDLEALRENEYVPPCNELEQ
ELVRIWSMVLPSNLPMDRIGVMDNFFTLGGSSLKATKLVSLVLRELGIDLPLTKLFTYPT
IRQLADALNGRAKSEFPARADTLVLLKPGTSQDKHLFFIHDGSLDVSCYMELVNELTATW
NYWGIKMDASILARNKTAGMKEAAHRYVDQIKSIQEKGPYYVAGWSMGGTIAFEMTRQLE
EQEERVELLAILDTLPPLKYGKEDHWDRHIQELERMEETLDLSLWKRAFPASVLPLLPEF
HELGRNELLERFKSVNHWVKMQHIYRPDRVVTAPVCLFISEHTWELGYKGWEMYCRGEMY
THKVPGDHFSIVKGAQAVSVGLVLNTFLR

Enzyme Prediction     

No EC number prediction in MGYG000003687_01235.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK05691	PRK05691	0.0	9	1025	1732	2772	peptide synthase; Validated
PRK12316	PRK12316	0.0	33	1038	1583	2593	peptide synthase; Provisional
PRK10252	entF	0.0	11	1289	13	1295	enterobactin non-ribosomal peptide synthetase EntF.
PRK05691	PRK05691	0.0	9	1016	679	1693	peptide synthase; Validated
COG1020	EntF	0.0	218	868	1	642	Non-ribosomal peptide synthetase component F [Secondary metabolites biosynthesis, transport and catabolism].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QND46664.1	5.21e-204	9	1285	1618	2932
BAZ00088.1	2.76e-192	9	1157	2248	3417
BAZ75991.1	2.76e-192	9	1157	2248	3417
BAY30132.1	2.96e-189	12	1157	2253	3419
BAY90071.1	3.34e-188	9	1289	2239	3553

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6MFZ_A	3.36e-199	6	1025	786	1794	Crystalstructure of dimodular LgrA in a condensation state [Brevibacillus parabrevis],6MFZ_B Crystal structure of dimodular LgrA in a condensation state [Brevibacillus parabrevis]
6MFY_A	5.74e-181	6	951	786	1726	Crystalstructure of a 5-domain construct of LgrA in the substrate donation state [Brevibacillus parabrevis],6MG0_A Crystal structure of a 5-domain construct of LgrA in the thiolation state [Brevibacillus parabrevis],6MG0_B Crystal structure of a 5-domain construct of LgrA in the thiolation state [Brevibacillus parabrevis]
6P1J_A	1.11e-171	6	938	6	964	Thestructure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo2 serine module [Eleftheria terrae],6P1J_B The structure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo2 serine module [Eleftheria terrae]
2VSQ_A	6.44e-159	6	1154	13	1148	Structureof surfactin A synthetase C (SrfA-C), a nonribosomal peptide synthetase termination module [Bacillus subtilis]
6OYF_A	4.84e-150	9	852	6	873	Thestructure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo1 serine module [Eleftheria terrae],6OZV_A The structure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo1 serine module in complex with AMP [Eleftheria terrae],6P4U_A The structure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo1 serine module in complex with Mg and AMP [Eleftheria terrae]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P0C064	4.49e-285	4	1053	1060	2095	Gramicidin S synthase 2 OS=Brevibacillus brevis OX=1393 GN=grsB PE=1 SV=2
P0C063	1.14e-284	4	1061	1060	2111	Gramicidin S synthase 2 OS=Aneurinibacillus migulanus OX=47500 GN=grsB PE=3 SV=2
O30409	5.74e-277	4	1036	3129	4154	Tyrocidine synthase 3 OS=Brevibacillus parabrevis OX=54914 GN=tycC PE=1 SV=1
P39847	2.77e-252	4	1025	1056	2070	Plipastatin synthase subunit C OS=Bacillus subtilis (strain 168) OX=224308 GN=ppsC PE=1 SV=2
O68007	1.62e-248	4	1044	1105	2141	Bacitracin synthase 2 OS=Bacillus licheniformis OX=1402 GN=bacB PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000063	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003687_01235.