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CAZyme Information: MGYG000003642_01285

You are here: Home > Sequence: MGYG000003642_01285

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species RUG572 sp900771305
Lineage Bacteria; Verrucomicrobiota; Kiritimatiellae; RFP12; UBA1067; RUG572; RUG572 sp900771305
CAZyme ID MGYG000003642_01285
CAZy Family GH39
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
528 MGYG000003642_242|CGC1 60768.57 8.5731
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003642 3810265 MAG Fiji Oceania
Gene Location Start: 3517;  End: 5103  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003642_01285.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH39 135 290 1.3e-16 0.382830626450116

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00633 Glyco_10 4.52e-05 132 281 3 149
Glycosyl hydrolase family 10.
COG2723 BglB 5.49e-05 158 219 113 169
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].
pfam01229 Glyco_hydro_39 2.14e-04 142 245 74 192
Glycosyl hydrolases family 39.
COG3693 XynA 0.001 132 262 69 205
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
pfam02449 Glyco_hydro_42 0.001 116 172 17 75
Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNN22472.1 6.70e-149 66 523 30 471
BBL15167.1 7.01e-108 66 528 29 483
BBL03131.1 7.01e-108 66 528 29 483
AEI51086.1 4.41e-92 79 519 42 479
QHV94132.1 1.29e-90 77 523 37 481

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000270 0.999050 0.000162 0.000200 0.000164 0.000140

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003642_01285.