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CAZyme Information: MGYG000003573_01709
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | RC9 sp900769905 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA932; RC9; RC9 sp900769905 | |||||||||||
| CAZyme ID | MGYG000003573_01709 | |||||||||||
| CAZy Family | GH3 | |||||||||||
| CAZyme Description | Xylan 1,4-beta-xylosidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 21546; End: 24152 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH3 | 65 | 313 | 1.4e-62 | 0.9768518518518519 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PLN03080 | PLN03080 | 4.88e-117 | 21 | 827 | 32 | 744 | Probable beta-xylosidase; Provisional |
| PRK15098 | PRK15098 | 2.43e-105 | 15 | 868 | 9 | 765 | beta-glucosidase BglX. |
| COG1472 | BglX | 1.06e-61 | 63 | 440 | 53 | 396 | Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism]. |
| pfam01915 | Glyco_hydro_3_C | 2.04e-45 | 384 | 749 | 1 | 216 | Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. |
| pfam00933 | Glyco_hydro_3 | 8.30e-35 | 67 | 343 | 63 | 315 | Glycosyl hydrolase family 3 N terminal domain. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QCD36993.1 | 0.0 | 19 | 867 | 36 | 888 |
| ADE83440.1 | 0.0 | 28 | 867 | 22 | 868 |
| QVJ80234.1 | 0.0 | 28 | 867 | 22 | 868 |
| QUT44634.1 | 0.0 | 1 | 867 | 1 | 883 |
| QRQ48937.1 | 0.0 | 14 | 867 | 6 | 883 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7VC7_A | 1.38e-87 | 11 | 849 | 10 | 715 | ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium] |
| 7VC6_A | 1.38e-87 | 11 | 849 | 10 | 715 | ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium] |
| 5Z87_A | 3.16e-85 | 51 | 862 | 101 | 779 | ChainA, EmGH1 [Aurantiacibacter marinus],5Z87_B Chain B, EmGH1 [Aurantiacibacter marinus] |
| 6Q7I_A | 4.16e-76 | 30 | 849 | 41 | 737 | GH3exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7I_B GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7J_A Chain A, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4],6Q7J_B Chain B, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4] |
| 5TF0_A | 8.12e-76 | 53 | 855 | 66 | 740 | CrystalStructure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393],5TF0_B Crystal Structure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| D5EY15 | 6.29e-234 | 30 | 863 | 23 | 857 | Xylan 1,4-beta-xylosidase OS=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) OX=264731 GN=xyl3A PE=1 SV=1 |
| Q94KD8 | 6.43e-99 | 7 | 861 | 35 | 759 | Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana OX=3702 GN=BXL2 PE=2 SV=1 |
| Q9FLG1 | 4.84e-98 | 9 | 828 | 38 | 752 | Beta-D-xylosidase 4 OS=Arabidopsis thaliana OX=3702 GN=BXL4 PE=1 SV=1 |
| A5JTQ2 | 2.90e-94 | 12 | 818 | 36 | 729 | Beta-xylosidase/alpha-L-arabinofuranosidase 1 (Fragment) OS=Medicago sativa subsp. varia OX=36902 GN=Xyl1 PE=1 SV=1 |
| A5JTQ3 | 2.91e-93 | 12 | 828 | 36 | 742 | Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia OX=36902 GN=Xyl2 PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as LIPO
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000305 | 0.263336 | 0.736037 | 0.000102 | 0.000129 | 0.000107 |