CAZyme Information: MGYG000003550_00806

Basic Information

• Species: Clostridium sp900769625
• Lineage: Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium sp900769625
• CAZyme ID: MGYG000003550_00806
• CAZy Family: GH25
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
313		36097.89	6.9921

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003550	3104477	MAG	Fiji	Oceania

• Gene Location: Start: 99653; End: 100594 Strand: -

Full Sequence      

MQDKNPRSLFGIDINEYTQNVQFNILATKIDFLYLRSSGSGSGRFRVDKKFFDYVSSSRE
YGIPVGAYHFGVPSYDLTDADRQCDDFIQVLQQGFGNRNYGDLFPVLDVETPIDKSISTK
VLVEWIDRFRKRFEKKTRRRLMLYTGLFFIEIYDNFYVQGRGYPLKNMILWIAMYTSVPI
NPKVPPDIGGWTRWRVWQYSEGQRIQGVGNPVDANWGPDDIALLMQPKDVSGLRARLENG
KIYVSWNKNSDSDLLGYNIFLNKEWVGTVEADDTSFVIGADKVKQISARPLEVSIEAFDY
DGETSFNRAKVRL

Enzyme Prediction     

No EC number prediction in MGYG000003550_00806.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH25	12	208	4.6e-35	0.9943502824858758

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd00599	GH25_muramidase	1.29e-43	11	216	2	185	Endo-N-acetylmuramidases (muramidases) are lysozymes (also referred to as peptidoglycan hydrolases) that degrade bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues. This family of muramidases contains a glycosyl hydrolase family 25 (GH25) catalytic domain and is found in bacteria, fungi, slime molds, round worms, protozoans and bacteriophages. The bacteriophage members are referred to as endolysins which are involved in lysing the host cell at the end of the replication cycle to allow release of mature phage particles. Endolysins are typically modular enzymes consisting of a catalytically active domain that hydrolyzes the peptidoglycan cell wall and a cell wall-binding domain that anchors the protein to the cell wall. Endolysins generally have narrow substrate specificities with either intra-species or intra-genus bacteriolytic activity.
cd06524	GH25_YegX-like	1.50e-34	10	215	1	190	YegX is an uncharacterized bacterial protein with a glycosyl hydrolase family 25 (GH25) catalytic domain that is similar in sequence to the CH-type (Chalaropsis-type) lysozymes of the GH25 family of endolysins.
pfam01183	Glyco_hydro_25	2.29e-27	12	208	1	180	Glycosyl hydrolases family 25.
cd06525	GH25_Lyc-like	1.11e-22	11	215	2	182	Lyc muramidase is an autolytic lysozyme (autolysin) from Clostridium acetobutylicum encoded by the lyc gene. Lyc has a glycosyl hydrolase family 25 (GH25) catalytic domain. Endo-N-acetylmuramidases are lysozymes (also referred to as peptidoglycan hydrolases) that degrade bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues.
COG3757	Acm	7.05e-19	3	215	55	251	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family [Cell wall/membrane/envelope biogenesis].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QGH21342.1	1.20e-212	1	313	1	313
QGH25379.1	1.20e-212	1	313	1	313
QSX03357.1	9.87e-212	1	313	1	313
QJU45417.1	9.87e-212	1	313	1	313
AXB86013.1	9.87e-212	1	313	1	313

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5JIP_A	2.19e-130	2	310	7	315	Crystalstructure of the Clostridium perfringens spore cortex lytic enzyme SleM [Clostridium perfringens],5JIP_B Crystal structure of the Clostridium perfringens spore cortex lytic enzyme SleM [Clostridium perfringens]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000051	0.000003	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003550_00806.