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CAZyme Information: MGYG000003535_00515

You are here: Home > Sequence: MGYG000003535_00515

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp004556065
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp004556065
CAZyme ID MGYG000003535_00515
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
730 MGYG000003535_24|CGC1 80025.64 5.7009
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003535 2652504 MAG Fiji Oceania
Gene Location Start: 39417;  End: 41609  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003535_00515.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 76 278 7.6e-66 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 5.71e-08 3 253 5 276
Pectate lyase [Carbohydrate transport and metabolism].
pfam18884 TSP3_bac 1.80e-04 461 482 1 22
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNT67774.1 2.97e-265 23 545 3 552
AGB28243.1 4.14e-222 3 527 4 525
VEH16322.1 6.45e-222 16 527 19 530
QCD40778.1 2.50e-198 10 527 5 541
QCP73827.1 2.50e-198 10 527 5 541

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B0XMA2 1.11e-38 12 509 8 417
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 1.11e-38 12 509 8 417
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
B8NQQ7 2.75e-38 21 509 17 416
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
A1DPF0 3.81e-38 12 509 8 417
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
Q0CLG7 1.50e-36 8 509 3 416
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000319 0.998969 0.000190 0.000175 0.000159 0.000145

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003535_00515.