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CAZyme Information: MGYG000003535_00514

You are here: Home > Sequence: MGYG000003535_00514

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp004556065
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp004556065
CAZyme ID MGYG000003535_00514
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
709 MGYG000003535_24|CGC1 77529.63 5.4936
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003535 2652504 MAG Fiji Oceania
Gene Location Start: 37254;  End: 39383  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003535_00514.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 77 263 3.4e-76 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00656 Amb_all 1.53e-06 71 221 3 151
Amb_all domain.
COG3866 PelB 1.55e-05 67 381 72 341
Pectate lyase [Carbohydrate transport and metabolism].
pfam00544 Pec_lyase_C 7.94e-04 116 220 59 175
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT75603.1 1.53e-184 11 488 2 493
QUT77823.1 1.63e-182 26 488 53 523
QUT93111.1 9.60e-178 22 481 41 512
ALJ61309.1 1.56e-177 22 481 45 516
QCD39200.1 1.48e-174 26 707 28 780

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 1.58e-51 12 480 7 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q5B297 5.67e-50 26 482 22 413
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
Q2UB83 1.42e-49 12 480 7 414
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
Q4WL88 5.80e-46 11 480 7 415
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
B0XMA2 7.97e-46 11 480 7 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000232 0.999171 0.000146 0.000147 0.000138 0.000129

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003535_00514.