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CAZyme Information: MGYG000003530_01268
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | RC9 sp004554455 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA932; RC9; RC9 sp004554455 | |||||||||||
| CAZyme ID | MGYG000003530_01268 | |||||||||||
| CAZy Family | GH5 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 22913; End: 25339 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH5 | 505 | 767 | 1.7e-75 | 0.9831223628691983 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd17332 | MFS_MelB_like | 1.30e-96 | 11 | 449 | 1 | 422 | Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily. This family is composed of Salmonella enterica Na+/melibiose symporter MelB, Major Facilitator Superfamily domain-containing proteins, MFSD2 and MFSD12, and other sugar transporters. MelB catalyzes the electrogenic symport of galactosides with Na+, Li+ or H+. The MFSD2 subfamily is composed of two vertebrate members, MFSD2A and MFSD2B. MFSD2A is more commonly called sodium-dependent lysophosphatidylcholine symporter 1 (NLS1). It is an LPC symporter that plays an essential role for blood-brain barrier formation and function. Inactivating mutations in MFSD2A cause a lethal microcephaly syndrome. MFSD2B is a potential risk or protect factor in the prognosis of lung adenocarcinoma. MelB-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. |
| COG2211 | MelB | 1.50e-93 | 1 | 453 | 4 | 442 | Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism]. |
| TIGR00792 | gph | 2.64e-73 | 11 | 453 | 1 | 426 | sugar (Glycoside-Pentoside-Hexuronide) transporter. The Glycoside-Pentoside-Hexuronide (GPH):Cation Symporter Family (TC 2.A.2) GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids] |
| pfam13347 | MFS_2 | 1.04e-71 | 13 | 449 | 1 | 425 | MFS/sugar transport protein. This family is part of the major facilitator superfamily of membrane transport proteins. |
| PRK09669 | PRK09669 | 1.47e-70 | 1 | 457 | 1 | 434 | putative symporter YagG; Provisional |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ADU86904.1 | 3.02e-134 | 491 | 808 | 24 | 320 |
| ADX05684.1 | 9.87e-118 | 458 | 808 | 8 | 347 |
| CRY96302.1 | 4.26e-94 | 484 | 808 | 15 | 313 |
| BBK85897.1 | 7.05e-94 | 465 | 804 | 3 | 311 |
| QUT65069.1 | 8.86e-94 | 465 | 804 | 10 | 318 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1EGZ_A | 1.44e-52 | 494 | 799 | 5 | 287 | ChainA, ENDOGLUCANASE Z [Dickeya chrysanthemi],1EGZ_B Chain B, ENDOGLUCANASE Z [Dickeya chrysanthemi],1EGZ_C Chain C, ENDOGLUCANASE Z [Dickeya chrysanthemi] |
| 1TVN_A | 1.57e-48 | 494 | 800 | 5 | 292 | Cellulasecel5G from Pseudoalteromonas haloplanktis, A family GH 5-2 enzyme [Pseudoalteromonas haloplanktis],1TVN_B Cellulase cel5G from Pseudoalteromonas haloplanktis, A family GH 5-2 enzyme [Pseudoalteromonas haloplanktis],1TVP_A Endoglucanase cel5G from Pseudoalteromonas haloplanktis in complex with cellobiose [Pseudoalteromonas haloplanktis],1TVP_B Endoglucanase cel5G from Pseudoalteromonas haloplanktis in complex with cellobiose [Pseudoalteromonas haloplanktis] |
| 5IHS_A | 3.47e-48 | 506 | 804 | 48 | 317 | Structureof CHU_2103 from Cytophaga hutchinsonii [Cytophaga hutchinsonii ATCC 33406] |
| 4XZB_A | 1.22e-46 | 494 | 804 | 12 | 300 | endo-glucanaseGsCelA P1 [Geobacillus sp. 70PC53] |
| 4XZW_A | 3.02e-43 | 494 | 804 | 12 | 299 | Endo-glucanasechimera C10 [uncultured bacterium] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q07940 | 3.71e-51 | 494 | 808 | 5 | 295 | Endoglucanase 4 OS=Ruminococcus albus OX=1264 GN=Eg IV PE=1 SV=1 |
| P31435 | 4.37e-51 | 1 | 447 | 1 | 427 | Inner membrane symporter YicJ OS=Escherichia coli (strain K12) OX=83333 GN=yicJ PE=1 SV=2 |
| P07103 | 9.89e-51 | 485 | 799 | 39 | 330 | Endoglucanase Z OS=Dickeya dadantii (strain 3937) OX=198628 GN=celZ PE=1 SV=2 |
| P75683 | 4.37e-48 | 5 | 462 | 3 | 441 | Putative glycoside/cation symporter YagG OS=Escherichia coli (strain K12) OX=83333 GN=yagG PE=1 SV=1 |
| P22541 | 1.23e-43 | 494 | 798 | 116 | 398 | Endoglucanase A OS=Butyrivibrio fibrisolvens OX=831 GN=celA PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000040 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
TMHMM Annotations download full data without filtering help
| start | end |
|---|---|
| 21 | 43 |
| 48 | 70 |
| 83 | 100 |
| 115 | 137 |
| 149 | 171 |
| 181 | 203 |
| 230 | 252 |
| 267 | 289 |
| 302 | 321 |
| 326 | 348 |
| 382 | 404 |
| 424 | 446 |
| 459 | 481 |