CAZyme Information: MGYG000003443_00017

Basic Information

• Species: UBA1067 sp900767325
• Lineage: Bacteria; Verrucomicrobiota; Kiritimatiellae; RFP12; UBA1067; UBA1067; UBA1067 sp900767325
• CAZyme ID: MGYG000003443_00017
• CAZy Family: GH110
• CAZyme Description: Alpha-1,3-galactosidase B

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
484		53200.79	8.2706

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003443	1101788	MAG	Fiji	Oceania

• Gene Location: Start: 20277; End: 21731 Strand: +

Full Sequence      

MHMMGLLVLAAAVTLSPQGEKDMTDALKGAVRSNVVIKLAEGTYHFFDTSATKDVFYVSN
HDQPNPRTVQLPLTNVTNLTIKGEGKGAKFMFHGESMGILVRDTEKVQLENISLDWAEPT
VSEFRVGTGWMVKGCYGEAPIRMVWDGATKSIKPGTGDAFNESKAVEGDTISYRSGARPE
PAICLYRASKTVLKNIVIHSAHGMGLLGQRSKDVAILGGGVYPREGSVCSTTADATHFSN
CRGKIVCKGARFAGMMDDAINVHSTCLRIEEKLADNKIRCRYMHGQSIGFEVFAKGEKLR
FIRAETLENGPEVRVVAVEMPDPRTAIITLKDGAALKEYAVGDAVENADWQPSVVFSGNW
VGRNRARGTLFTTPKPVLIENNTFDHVSGTAILLAGDASGWFESGACRDVTIQNNRFIDC
LTSSYQFCTAVITAYPMVRNLKEQKRPYHGNITVKNNEFRCPGAKLQSWISTENVVWREN
KEMK

Enzyme Prediction     

No EC number prediction in MGYG000003443_00017.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH110	163	481	2.4e-112	0.5766423357664233

CDD Domains     

MGYG000003443_00017 has no CDD domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUE51756.1	2.99e-128	11	481	172	693
SEH88108.1	1.37e-126	8	481	161	685
QJE96647.1	7.34e-123	15	481	171	685
QWO89927.1	1.10e-121	17	481	198	709
QWO84961.1	1.10e-121	17	481	198	709

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
7JW4_A	1.36e-52	37	480	62	564	Crystalstructure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta],7JW4_B Crystal structure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta]
7JWF_A	6.89e-52	37	480	62	564	Crystalstructure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_B Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_C Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_D Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
B2UNU8	7.33e-117	3	481	214	739	Alpha-1,3-galactosidase B OS=Akkermansia muciniphila (strain ATCC BAA-835 / DSM 22959 / JCM 33894 / BCRC 81048 / CCUG 64013 / CIP 107961 / Muc) OX=349741 GN=glaB PE=3 SV=1
Q64XV2	4.09e-105	35	480	63	565	Alpha-1,3-galactosidase B OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=glaB PE=3 SV=1
Q5LGZ8	5.77e-105	35	480	63	565	Alpha-1,3-galactosidase B OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / NCTC 9343 / Onslow) OX=272559 GN=glaB PE=1 SV=1
A6KWM0	3.09e-100	35	480	60	562	Alpha-1,3-galactosidase B OS=Phocaeicola vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / CCUG 4940 / NBRC 14291 / NCTC 11154) OX=435590 GN=glaB1 PE=3 SV=1
A6LFT2	4.08e-99	11	482	29	567	Alpha-1,3-galactosidase B OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / CIP 104284 / JCM 5825 / NCTC 11152) OX=435591 GN=glaB PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.004077	0.994925	0.000323	0.000232	0.000203	0.000209

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003443_00017.