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CAZyme Information: MGYG000003423_01910

You are here: Home > Sequence: MGYG000003423_01910

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species W3P20-009 sp900766825
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; W3P20-009; W3P20-009; W3P20-009 sp900766825
CAZyme ID MGYG000003423_01910
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
611 66855.68 5.3881
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003423 2824109 MAG Fiji Oceania
Gene Location Start: 10025;  End: 11860  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003423_01910.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 91 290 6.5e-70 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00656 Amb_all 1.67e-08 101 250 12 169
Amb_all domain.
COG3866 PelB 9.59e-07 10 235 3 236
Pectate lyase [Carbohydrate transport and metabolism].
pfam18884 TSP3_bac 4.57e-05 461 482 1 22
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCD40778.1 1.30e-216 18 608 1 597
QCP73827.1 1.30e-216 18 608 1 597
QNT67774.1 4.88e-161 35 608 3 585
VEH16322.1 1.03e-159 16 530 7 530
AGB28243.1 1.86e-150 19 530 5 525

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q0CLG7 8.00e-34 38 507 22 414
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
Q5B297 2.09e-33 38 507 22 411
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
B8NQQ7 6.97e-33 38 507 22 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
A1DPF0 6.12e-32 38 507 23 415
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
Q2UB83 2.80e-31 38 507 22 414
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000362 0.998874 0.000235 0.000200 0.000167 0.000154

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003423_01910.