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CAZyme Information: MGYG000003402_03704

You are here: Home > Sequence: MGYG000003402_03704

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Paenibacillus lactis
Lineage Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus; Paenibacillus lactis
CAZyme ID MGYG000003402_03704
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1885 214019.27 5.1289
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003402 5924245 MAG United States North America
Gene Location Start: 576;  End: 6233  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003402_03704.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4646 COG4646 2.87e-75 584 1112 1 540
Adenine-specific DNA methylase, N12 class [Replication, recombination and repair].
COG4646 COG4646 1.55e-30 1211 1444 401 637
Adenine-specific DNA methylase, N12 class [Replication, recombination and repair].
COG0553 HepA 1.49e-08 695 1621 33 848
Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair].
COG0827 YtxK 3.10e-08 430 558 219 341
Adenine-specific DNA methylase [Replication, recombination and repair].
smart00487 DEXDc 3.22e-08 1056 1159 7 110
DEAD-like helicases superfamily.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ASV45029.1 0.0 268 1876 1534 3198
QIW86704.1 0.0 268 1864 1602 3267
QIW86628.1 0.0 268 1864 1602 3267
AXF51455.1 0.0 268 1862 1768 3434
AEY69616.1 0.0 281 1870 1685 3349

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q71TF8 2.36e-36 304 1668 51 1617
Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000050 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003402_03704.