logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003401_01459

You are here: Home > Sequence: MGYG000003401_01459

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Staphylococcus capitis
Lineage Bacteria; Firmicutes; Bacilli; Staphylococcales; Staphylococcaceae; Staphylococcus; Staphylococcus capitis
CAZyme ID MGYG000003401_01459
CAZy Family GH73
CAZyme Description Bifunctional autolysin
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
257 MGYG000003401_28|CGC2 29704.78 9.4701
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003401 2394594 MAG United States North America
Gene Location Start: 106960;  End: 107733  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003401_01459.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 114 240 1.5e-24 0.9609375

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4193 LytD 2.18e-96 18 257 6 245
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
smart00047 LYZ2 1.63e-32 102 241 2 140
Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.
pfam01832 Glucosaminidase 3.49e-08 113 182 1 70
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyze peptidoglycan.
COG1705 FlgJ 0.001 104 170 34 102
Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ATN02082.1 6.15e-187 1 257 1 257
QOX60101.1 6.15e-187 1 257 1 257
BAW90126.1 6.15e-187 1 257 1 257
QKH90430.1 6.15e-187 1 257 1 257
AKL92574.1 1.76e-186 1 257 1 257

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4PI7_A 1.58e-117 34 257 5 228
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]
4PI8_A 1.29e-116 34 257 5 228
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]
6FXO_A 4.68e-53 34 245 8 232
ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50]
6U0O_B 7.23e-50 2 243 6 262
ChainB, LYZ2 domain-containing protein [Staphylococcus aureus subsp. aureus NCTC 8325]
6FXP_A 1.25e-49 33 243 10 232
ChainA, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50],6FXP_B Chain B, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8CPQ1 1.61e-51 28 245 1088 1323
Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=atl PE=3 SV=1
Q5HQB9 1.61e-51 28 245 1088 1323
Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=atl PE=3 SV=1
O33635 1.61e-51 28 245 1088 1323
Bifunctional autolysin OS=Staphylococcus epidermidis OX=1282 GN=atl PE=1 SV=1
Q2FZK7 1.19e-49 28 245 1009 1244
Bifunctional autolysin OS=Staphylococcus aureus (strain NCTC 8325 / PS 47) OX=93061 GN=atl PE=1 SV=1
Q6GAG0 4.09e-49 28 245 1003 1238
Bifunctional autolysin OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=atl PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.956681 0.009356 0.004130 0.000079 0.000043 0.029728

TMHMM  Annotations      download full data without filtering help

start end
5 27