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CAZyme Information: MGYG000003387_03232

You are here: Home > Sequence: MGYG000003387_03232

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pseudomonas_R sp900766265
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas_R; Pseudomonas_R sp900766265
CAZyme ID MGYG000003387_03232
CAZy Family GH39
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
443 MGYG000003387_15|CGC3 49749.36 6.8154
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003387 4465621 MAG United States North America
Gene Location Start: 127235;  End: 128566  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003387_03232.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH39 127 351 6.3e-30 0.5498839907192575

CDD Domains      help

MGYG000003387_03232 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AGA87124.1 5.36e-184 12 431 16 436
VEI35262.1 8.49e-183 22 431 25 435
AFM33635.1 2.04e-181 12 431 16 436
AWM58306.1 6.48e-181 12 431 19 439
QFU12028.1 1.85e-180 12 431 16 439

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5JVK_A 4.28e-39 27 387 103 470
Structuralinsights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_B Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_C Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000902 0.998158 0.000352 0.000195 0.000187 0.000196

TMHMM  Annotations      download full data without filtering help

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