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CAZyme Information: MGYG000003358_03103

You are here: Home > Sequence: MGYG000003358_03103

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Kluyvera ascorbata
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Kluyvera; Kluyvera ascorbata
CAZyme ID MGYG000003358_03103
CAZy Family GH0
CAZyme Description HTH-type transcriptional activator RhaR
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
767 MGYG000003358_132|CGC2 88245.65 8.2669
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003358 4968008 MAG United States North America
Gene Location Start: 32626;  End: 34929  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003358_03103.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3664 XynB 2.88e-27 421 767 85 428
Beta-xylosidase [Carbohydrate transport and metabolism].
smart00342 HTH_ARAC 1.28e-24 181 264 1 84
helix_turn_helix, arabinose operon control protein.
COG2207 AraC 1.89e-24 164 266 19 121
AraC-type DNA-binding domain and AraC-containing proteins [Transcription].
pfam12833 HTH_18 7.36e-21 187 266 1 81
Helix-turn-helix domain.
COG4977 GlxA 8.65e-20 149 273 204 328
Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain [Transcription].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BBV66256.1 0.0 1 767 1 767
QIR29689.1 0.0 30 766 1 735
QGH39296.1 0.0 3 766 2 770
QGH30314.1 0.0 3 766 2 770
BBV76802.1 0.0 8 766 7 766

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6SWI_A 2.63e-14 171 264 6 105
TheC-terminal domain of AraT, a response regulator from Geobacillus stearothermophilus [Geobacillus stearothermophilus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q6GKK1 3.37e-37 27 762 23 738
Uncharacterized HTH-type transcriptional regulator SAR0107 OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=SAR0107 PE=4 SV=1
Q6GD21 1.43e-36 27 762 23 738
Uncharacterized HTH-type transcriptional regulator SAS0078 OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=SAS0078 PE=4 SV=1
Q8NYT6 1.43e-36 27 762 23 738
Uncharacterized HTH-type transcriptional regulator MW0077 OS=Staphylococcus aureus (strain MW2) OX=196620 GN=MW0077 PE=4 SV=1
Q936F1 1.43e-36 8 762 4 738
Uncharacterized HTH-type transcriptional regulator OS=Staphylococcus aureus OX=1280 PE=4 SV=2
Q5HJR8 3.39e-36 8 762 4 738
Uncharacterized HTH-type transcriptional regulator SACOL0084 OS=Staphylococcus aureus (strain COL) OX=93062 GN=SACOL0084 PE=4 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000073 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003358_03103.