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CAZyme Information: MGYG000003355_02505
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Lachnoclostridium phytofermentans_A | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnoclostridium; Lachnoclostridium phytofermentans_A | |||||||||||
| CAZyme ID | MGYG000003355_02505 | |||||||||||
| CAZy Family | CE8 | |||||||||||
| CAZyme Description | Pectinesterase A | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 7224; End: 8261 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CE8 | 12 | 332 | 2.8e-99 | 0.9722222222222222 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4677 | PemB | 3.75e-77 | 11 | 333 | 88 | 404 | Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism]. |
| pfam01095 | Pectinesterase | 6.98e-74 | 17 | 334 | 12 | 298 | Pectinesterase. |
| PLN02773 | PLN02773 | 8.26e-65 | 16 | 337 | 16 | 302 | pectinesterase |
| PLN02432 | PLN02432 | 8.18e-64 | 1 | 337 | 7 | 291 | putative pectinesterase |
| PLN02665 | PLN02665 | 8.63e-61 | 3 | 325 | 68 | 353 | pectinesterase family protein |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ABX41678.1 | 1.07e-238 | 1 | 345 | 1 | 345 |
| BCJ93650.1 | 3.37e-127 | 17 | 331 | 18 | 318 |
| QNM04098.1 | 1.02e-123 | 17 | 333 | 11 | 336 |
| SET76962.1 | 1.96e-123 | 5 | 337 | 2 | 319 |
| QIX89293.1 | 7.43e-121 | 16 | 337 | 26 | 346 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2NSP_A | 4.04e-44 | 7 | 331 | 8 | 334 | ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937] |
| 1QJV_A | 7.20e-39 | 7 | 331 | 8 | 334 | ChainA, PECTIN METHYLESTERASE [Dickeya chrysanthemi],1QJV_B Chain B, PECTIN METHYLESTERASE [Dickeya chrysanthemi] |
| 2NTB_A | 7.20e-39 | 7 | 331 | 8 | 334 | Crystalstructure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTB_B Crystal structure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTP_A Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTP_B Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTQ_A Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937],2NTQ_B Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937] |
| 1GQ8_A | 1.23e-37 | 16 | 333 | 18 | 304 | Pectinmethylesterase from Carrot [Daucus carota] |
| 3UW0_A | 8.60e-37 | 16 | 317 | 43 | 349 | Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q9FM79 | 5.87e-47 | 19 | 334 | 94 | 375 | Pectinesterase QRT1 OS=Arabidopsis thaliana OX=3702 GN=QRT1 PE=1 SV=1 |
| Q9LVQ0 | 7.00e-47 | 1 | 322 | 1 | 287 | Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1 |
| Q43043 | 1.07e-45 | 16 | 337 | 68 | 359 | Pectinesterase OS=Petunia integrifolia OX=4103 GN=PPE1 PE=2 SV=1 |
| Q8GXA1 | 1.28e-44 | 16 | 334 | 267 | 554 | Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana OX=3702 GN=PME23 PE=2 SV=3 |
| Q43062 | 2.46e-43 | 17 | 334 | 219 | 506 | Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica OX=3760 PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000026 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |