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CAZyme Information: MGYG000003337_02218

You are here: Home > Sequence: MGYG000003337_02218

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Ruminococcus_C sp900765125
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus_C; Ruminococcus_C sp900765125
CAZyme ID MGYG000003337_02218
CAZy Family CE3
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
448 MGYG000003337_395|CGC1 49310.34 4.0038
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003337 2462692 MAG China Asia
Gene Location Start: 2932;  End: 4278  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003337_02218.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE3 54 211 1e-25 0.6494845360824743

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd01833 XynB_like 1.64e-24 54 302 2 157
SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
pfam00657 Lipase_GDSL 4.75e-15 55 298 1 224
GDSL-like Lipase/Acylhydrolase.
pfam13472 Lipase_GDSL_2 2.71e-13 57 293 1 176
GDSL-like Lipase/Acylhydrolase family. This family of presumed lipases and related enzymes are similar to pfam00657.
cd14256 Dockerin_I 6.25e-11 388 443 1 56
Type I dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type I dockerins, which are responsible for anchoring a variety of enzymatic domains to the complex.
pfam00404 Dockerin_1 2.29e-08 389 437 1 49
Dockerin type I repeat. The dockerin repeat is the binding partner of the cohesin domain pfam00963. The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome. The dockerin repeats, each bearing homology to the EF-hand calcium-binding loop bind calcium.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CAB55348.1 3.64e-38 14 310 7 268
AWI67000.1 4.75e-32 47 302 92 314
CAA84537.1 3.64e-25 48 306 434 659
AAB69092.1 3.49e-24 51 306 61 279
AAQ10005.1 9.81e-23 52 306 44 263

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2VPT_A 5.58e-12 51 298 4 191
ChainA, LIPOLYTIC ENZYME [Acetivibrio thermocellus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9RLB8 7.29e-39 14 310 7 268
Multidomain esterase OS=Ruminococcus flavefaciens OX=1265 GN=cesA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.047049 0.947665 0.002879 0.001810 0.000313 0.000272

TMHMM  Annotations      download full data without filtering help

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