CAZyme Information: MGYG000003237_02444

Basic Information

• Species: Victivallis sp002998355
• Lineage: Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; Victivallaceae; Victivallis; Victivallis sp002998355
• CAZyme ID: MGYG000003237_02444
• CAZy Family: GH50
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
669	MGYG000003237_65|CGC5	76077.01	6.9931

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003237	4618450	MAG	United States	North America

• Gene Location: Start: 129312; End: 131321 Strand: -

Full Sequence      

MKRYIFAMLGVAGTLLADAPSLEVDRYGQYTGEDWPGKVTCDEQLRAEAAREWPLIRDAG
FDPARFDRFGGRLDAGDFEATGRFRKKKIDGRWWLITPEGHRCFIIGCDAVGYREGGYSS
PLKEPDGSARQGFLELPDLKRVPDGISGGKVNFLAANLEKKYGPGYYEKSKEVNRRRLIA
WGFNSTAKWGWGETFGLPYVEDWTFRTVKRLPRRRIDIYDPGFAAAAGKEVAALTARRRD
DPMLIAYSTENENGWEARDVNELAAAEPAVASKQALVDFLIRRRGEAEAAELFRVSGGRG
AMLENRQRIALPAEDVADFITEASRHYHRIVRELFRRYDPGHLWFGASHCRGQSDEWIYA
AAEFTDAVMLNEYDLYAQWSTGLMPRLRELDNPVFLTEFSFVCDRRGLRPYNSVSTVRDQ
RSRGLAYRHYTERMAANPLCIGFGYFIFFDQPVMMRSLPVGESFNFGLVDGTDRPYDEMI
AEVMKSNVRLEAVHAGREEPFRLEKPAALLFSRMRGQLLAGILPGTVSEYVTTDSSNAAE
YFGGCPLRLKIDERRLSADGADGGRCPVGTFHAGDNSRFGEVKADVYFWFRHRGKDLNDY
YELEGSPDGRNFTRLPLRFELVRRSEFDHYVMCNAEPVPADMRYLRIVLKAPVLRESWSN
QIAGITVER

Enzyme Prediction     

No EC number prediction in MGYG000003237_02444.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH50	24	490	3.9e-67	0.7702909647779479

CDD Domains     

MGYG000003237_02444 has no CDD domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AVM46385.1	0.0	1	669	1	669
QRO01254.1	1.35e-94	21	504	214	703
BBI31951.1	9.28e-79	18	494	604	1100
BAU73385.1	2.95e-54	24	506	213	735
QBG46742.1	5.01e-53	2	497	207	749

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4BQ2_A	5.92e-35	24	496	204	748	Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
4BQ4_A	1.41e-34	24	496	204	748	Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ4_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
6XJ9_A	1.10e-31	24	487	223	755	Structureof PfGH50B [Pseudoalteromonas fuliginea],6XJ9_B Structure of PfGH50B [Pseudoalteromonas fuliginea]
5Z6P_A	4.59e-31	24	487	223	755	Thecrystal structure of an agarase, AgWH50C [Agarivorans gilvus],5Z6P_B The crystal structure of an agarase, AgWH50C [Agarivorans gilvus]
5T3B_A	1.16e-08	67	479	84	461	ChainA, Glycoside Hydrolase [Phocaeicola plebeius],5T3B_B Chain B, Glycoside Hydrolase [Phocaeicola plebeius]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P48840	1.63e-36	17	487	423	945	Beta-agarase B OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaB PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000405	0.998861	0.000201	0.000189	0.000178	0.000157

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003237_02444.