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CAZyme Information: MGYG000003237_01995

You are here: Home > Sequence: MGYG000003237_01995

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Victivallis sp002998355
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; Victivallaceae; Victivallis; Victivallis sp002998355
CAZyme ID MGYG000003237_01995
CAZy Family GH39
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
615 MGYG000003237_57|CGC1 69018.04 6.5797
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003237 4618450 MAG United States North America
Gene Location Start: 24916;  End: 26763  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003237_01995.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH39 65 234 2.1e-23 0.4733178654292343

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3693 XynA 3.55e-06 55 162 67 185
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
COG3867 GanB 2.88e-05 40 167 69 219
Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism].
COG1874 GanA 1.26e-04 22 108 18 106
Beta-galactosidase GanA [Carbohydrate transport and metabolism].
pfam01229 Glyco_hydro_39 2.91e-04 13 245 23 281
Glycosyl hydrolases family 39.
pfam02449 Glyco_hydro_42 8.95e-04 30 170 6 125
Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVM44885.1 6.22e-160 13 614 15 612
QDU57372.1 3.97e-111 20 615 28 627
AVM44901.1 2.05e-49 17 527 22 546
CCW36010.1 2.68e-33 33 243 41 256
VEG09088.1 1.91e-30 22 239 43 276

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4ZN2_A 4.12e-11 23 238 22 254
Glycosylhydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],4ZN2_B Glycosyl hydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],4ZN2_C Glycosyl hydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],4ZN2_D Glycosyl hydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1]
5BX9_A 4.12e-11 23 238 22 254
Structureof PslG from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],5BXA_A Structure of PslG from Pseudomonas aeruginosa in complex with mannose [Pseudomonas aeruginosa PAO1]
5JVK_A 6.13e-11 23 243 107 349
Structuralinsights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_B Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_C Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000279 0.998984 0.000239 0.000166 0.000150 0.000150

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003237_01995.