CAZyme Information: MGYG000003237_01849

Basic Information

• Species: Victivallis sp002998355
• Lineage: Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; Victivallaceae; Victivallis; Victivallis sp002998355
• CAZyme ID: MGYG000003237_01849
• CAZy Family: GH42
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1020		113053.83	7.7473

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003237	4618450	MAG	United States	North America

• Gene Location: Start: 6738; End: 9800 Strand: +

Full Sequence      

MKLRLTLAALAAASAAFALDPLEKADACSTQLSPELVPAEGYFPIGVLGDHRFRLLPFAG
LNLCETSHCCYEFKDGKPCAYRKAGNGKGLFFFNVWAAHTVYNSSETKHYGTIKRPVSDS
GREYGRQMIRYFDPATRQYVLDAAAATVDSVMKQGDRGSVFIWGIDNEWEPPLDYSEEAV
TAFRAFLEKAYGGDLSKLNRAWGETYKAFADAQPPKVAEYTLKPGAWLDWRRFQEEAYAD
FIRDYFKAIQERDPDHRAVVTKSTQCTIEMQSVVRNRALNHEILADRTRDLSKGWYGIDQ
YGHGDRNTYEMNYLYHCILPNDPAERKFRYGVFSGEANNHAGPGWQFAQSYWRLPSNGYK
GGNFFVLGYFGAKNDYSTFGLTAPDGVRRSRFHYLTRYAAMIHRSEPFWAKAEPAAGVPR
IAMLMPQRDILLANDTGVSRWDYSTNNRLSVYSHLRNAGYWVDVIPYGKLNPAFLKQYGA
LFLVGAEHLSPKECADIEAFVQAGGKLYSDMRAGSFDEHHLEARGLEKVLGLRHKGVYTG
IEVSPDDVWYNTEYGNVIRGDGKILYETTTGKLLNAEDLFHNAKAAQVVGNDYGKGKSFW
FTTRLGALRPESVEPMVVSNFFGGWLKRGGVKPAYAHSTAGGDRLRVEQPQMTADGNLAI
AVAGATRFALPAGTLTVALPAAAKFTHAFWAPAESALLEKVAFTRTADGAAFALPEVKTA
GILYCFTTPEPLLGIAVLNPRHAAKSDPATPELVPGETVKVKVQLANPGTTELAAGAVTL
RAPADWKAEPAKFDTAALKPGELREFTFQVTIPESSAHFRPNFVYPLVAEFTAGGARTGV
IHQSVGMRLDPKKFDHLLSDNATDGRFPRDFAIRTGAEYIYNFPEELPDGQYVKDPSSNK
TPGRSGNGLTDGLDWWSRRVTFAMPEAEVVFDLKSAYEVTAVNLRKGAPAFPNGIEVEVS
EDGKSFRTVAKAPKPDWDEGGWTMVKTEPAKGRYVLVRIKYPTAKGGYLDELEIYGRPLK

Enzyme Prediction     

No EC number prediction in MGYG000003237_01849.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH42	116	264	3.9e-23	0.4123989218328841

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam02449	Glyco_hydro_42	1.73e-15	116	255	85	230	Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.
COG1874	GanA	3.83e-11	155	255	147	251	Beta-galactosidase GanA [Carbohydrate transport and metabolism].
pfam10633	NPCBM_assoc	1.32e-08	753	834	1	78	NPCBM-associated, NEW3 domain of alpha-galactosidase. The English-language version of the first reference can be found on pages 388-399 of the above. This domain has been named NEW3 but its actual function is not known. It is found on proteins which are bacterial galactosidases. The domain is associated with the NPCBM family, pfam08305, a novel putative carbohydrate binding module found at the N-terminus of glycosyl hydrolases.
pfam00754	F5_F8_type_C	1.97e-05	897	1008	5	118	F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam08532	Glyco_hydro_42M	3.61e-04	452	607	36	190	Beta-galactosidase trimerisation domain. This is non catalytic domain B of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. This domain is related to glutamine amidotransferase enzymes, but the catalytic residues are replaced by non functional amino acids. This domain is involved in trimerisation.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AVM46287.1	0.0	1	1020	1	1020
AWI09958.1	8.97e-149	132	1017	181	1104
AUZ35857.1	6.71e-14	116	281	108	271
QOT15950.1	6.73e-14	116	255	108	253
QQQ61747.1	6.73e-14	116	255	108	253

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
A1A399	1.94e-07	134	255	130	256	Beta-galactosidase BgaB OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) OX=367928 GN=bgaB PE=1 SV=2

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000330	0.998978	0.000164	0.000178	0.000160	0.000154

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003237_01849.