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CAZyme Information: MGYG000003199_01616

You are here: Home > Sequence: MGYG000003199_01616

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species HGM05190 sp900759815
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; HGM05190; HGM05190 sp900759815
CAZyme ID MGYG000003199_01616
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
615 MGYG000003199_158|CGC1 66702.11 5.0954
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003199 2346212 MAG United States North America
Gene Location Start: 7979;  End: 9826  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 4.2.2.2

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 78 268 9.9e-71 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 6.16e-05 1 327 1 305
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 4.70e-04 72 226 3 151
Amb_all domain.
pfam18884 TSP3_bac 0.007 506 527 1 22
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCD39200.1 5.18e-189 27 565 28 570
QCP72891.1 5.18e-189 27 565 28 570
QUT75603.1 3.96e-165 13 594 4 539
QUT77823.1 3.90e-159 27 552 53 518
QDO69223.1 5.57e-158 9 549 26 511

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q2UB83 4.57e-32 26 549 21 414
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
B8NQQ7 4.57e-32 26 549 21 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q5B297 4.03e-31 14 549 10 411
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
B0XMA2 1.29e-28 11 549 5 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 2.36e-28 14 549 7 415
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000228 0.999157 0.000163 0.000167 0.000153 0.000138

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003199_01616.