CAZyme Information: MGYG000003184_02307

Basic Information

• Species: Mixta calida
• Lineage: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Mixta; Mixta calida
• CAZyme ID: MGYG000003184_02307
• CAZy Family: GH105
• CAZyme Description: Unsaturated rhamnogalacturonyl hydrolase YesR

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
379	MGYG000003184_12|CGC2	44178.45	5.5788

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003184	4133670	MAG	United States	North America

• Gene Location: Start: 148675; End: 149814 Strand: +

Full Sequence      

MTVFPVKHSALLRQPEFLLPRPQLVQLIEKLTDNLVAITDESGEFLLRLDDGRVIDTKGW
AGWEWTHGIGLYGMYHYYQQTGDEKTLAIIDDWFRQRLAEGTPTKNVNTVCPLLTLAYRY
EETRNPALLPVLERWAEWVMYEMPRTEQGGLQHIVYNNENHQQLWDDTLMMSVLPLAKIG
KLLNRPEYVEEASYQFLLHVQYLMDRETGLWFHGWNFDGRHNFARARWARGNSWLTIVIP
EFIELMGWPEQHATRRFLQQVLESQVAALRQWQHESGLWHTLLDDRDSYLEASATAGFAY
GILKAVRKRYLSRDYLPMAELAVKGVVNHINEDGELTQVSFGTAMGSDLDYYRQIPLTSM
PYGQAMALLCLTEYLRVYL

Enzyme Prediction     

No EC number prediction in MGYG000003184_02307.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH105	60	376	3.1e-115	0.9698795180722891

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG4225	YesR	2.33e-128	29	379	2	354	Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].
pfam07470	Glyco_hydro_88	1.97e-121	38	378	2	343	Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AIX74114.1	9.55e-291	1	379	1	379
QNU44964.1	1.12e-289	1	379	1	379
AUY24928.1	1.85e-288	1	379	1	379
AUX93096.1	1.15e-282	1	379	1	379
ARJ44052.1	1.63e-282	1	379	1	379

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3QWT_A	2.87e-209	3	378	5	380	ChainA, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_B Chain B, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_C Chain C, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_D Chain D, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A]
3PMM_A	1.21e-201	3	378	6	381	ChainA, Putative cytoplasmic protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
4XUV_A	4.29e-145	28	379	12	373	Crystalstructure of a glycoside hydrolase family 105 (GH105) enzyme from Thielavia terrestris [Thermothielavioides terrestris NRRL 8126],4XUV_B Crystal structure of a glycoside hydrolase family 105 (GH105) enzyme from Thielavia terrestris [Thermothielavioides terrestris NRRL 8126]
3K11_A	2.61e-20	129	357	164	392	Crystalstructure of Putative glycosyl hydrolase (NP_813087.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 1.80 A resolution [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
O31521	1.36e-54	63	376	29	337	Unsaturated rhamnogalacturonyl hydrolase YesR OS=Bacillus subtilis (strain 168) OX=224308 GN=yesR PE=1 SV=1
P9WF04	1.11e-11	156	375	189	409	Unsaturated 3S-rhamnoglycuronyl hydrolase OS=Alteromonas sp. (strain LOR) OX=1537994 GN=LOR_28 PE=1 SV=1
P0A3U6	9.19e-09	180	307	10	143	Protein Atu3128 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=Atu3128 PE=3 SV=1
P0A3U7	9.19e-09	180	307	10	143	24.9 kDa protein in picA locus OS=Rhizobium radiobacter OX=358 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000059	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003184_02307.