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CAZyme Information: MGYG000003159_01338

You are here: Home > Sequence: MGYG000003159_01338

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp900556285
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900556285
CAZyme ID MGYG000003159_01338
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
501 53995.04 4.3178
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003159 1716642 MAG United States North America
Gene Location Start: 1115;  End: 2620  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003159_01338.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 26 495 5e-53 0.6359223300970874

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 3.48e-05 46 221 579 755
alpha-L-rhamnosidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ATP54541.1 1.42e-300 11 501 366 855
AZH68834.1 1.68e-215 11 496 373 863
QNM10672.1 5.25e-133 11 494 362 832
AGF57028.1 6.41e-105 15 495 364 846
APQ61832.1 8.52e-103 11 494 372 867

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000044 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003159_01338.