CAZyme Information: MGYG000003145_00841

Basic Information

• Species: UMGS822 sp900545825
• Lineage: Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Actinomycetaceae; UMGS822; UMGS822 sp900545825
• CAZyme ID: MGYG000003145_00841
• CAZy Family: GH136
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1440		152470.58	5.0718

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003145	2320952	MAG	United States	North America

• Gene Location: Start: 33544; End: 37866 Strand: +

Full Sequence      

MTRSHSWRSPSAPFSSSVHPRARRAVYVTTSGLAALALVATGAVGAHATLAQAAPEGDQP
AAGTTYTAVDRTKLKAIDTDSTETKGETGNNSGPLDRVLDGNNATYWHTQWQEDNLHNPN
HQGLPHWFVIGTKDGKAIQNVGQVTLTPRDVGDSSPSKGSGRFKTYTVSVASTGECTKNN
PNFKVVASGEVKAEDRSAQVSTFTPQAVSCVKVEVTKAWDAANSDENPYVSLAEFGLGVA
HNSDWATKPHYYDDVDQKTLAADDATDTDSTETLKEENTGHGYLKNVLDGNTSTFWHTQW
NTDSIHNPNHKEMPHWFIIKAKDGNAIANVGRVSLTPRGGSASGRLGDFEVFTRADGDCT
ENAAGWQSVAKKALSADEAKATQQVEFEPQTVKCVKVVVTKAYSGTGESTDPFASLAEFN
LGTYHEGTKPLPAAPKGTDPMNRPLADGAVSSSTILDPLKADDRKADNPEKTPIALKLPG
EDGKETYVGAHPMPGDGVLADKDVKGTAYHVDCKAKVTDSDGSVDKPYTSIEQINTHEAF
KAGDAILFKRGTVCEGLLHPHGSGEAGNPIVIDAYGTPSDALPIIHGHGIEEKADNDIPT
KLKTQTNKGIESAVVRFYNQHDWAVRHLELTNYTGDSGDYTMRRRGVVVAAEDAGRVSGF
EITGLTIRDVLGAPDKDLGGSGGIQFEAYAGPQKKATSFENLEVAYNTIRHVNRSGINEG
SDFRERESVGGSIKDNPFSVWGPMKVHDNIVSDIGGDAIVTQFASGSQVYNNTVWYSANF
HGGNSANGNNAAVWAWDADHVHFFNNHVFDTALPGDLNDGTAFDADYGTTGTIFEHNVSH
DNKGGFMLFCGCGGLSTRTIVRDNISINDGRGNESQVQGVRLFFMAGQADGEVYNNSFLL
YPGVKLDKGLSATNASTFQNNVYLAQGAVSSDYSNSVASSITYRNNLFAGTKDGWPETGQ
HNYVKPDVHPLKPTKARAAAVNDARLDYLRPANDEVAKKGLVVSRDKETDILGAARPANG
LTDLGAFQVSDVSEAQADPKASILLNGGFEEKAEDGKTPAWTLSEGAHVDGKAGQTDEGP
HGLVLDSADATATQVIHNVGVNHTYRLVAVVKPDKNGTYPTVSISNPKGATTDAVTKDFT
APSGTDWVPVSTLMRTAWDADKLTVTIKGPGSVDNLHLIPVDDYVVDGSFESRGNSPWSS
DARSEDAVSGGLALTGNSENHEVVVPKTGETYEVAAWTKLTDGKQVNVGAKGLGGTTNEK
FVPSTSEKYTESHLAISPENARFMVYTWLPNGGNALSDDFMVVPAWDGTAGVIPGETDPD
PGTTPDPGTTPDPGTSPDPGTSPDPGTTPDPGTTPDPGTTPDQPGTTPDQPGTTPDQPGT
TPTPNPKPTADNGKNAPKHQAKQSASALASTGAKAGLVAMLSIALLGAGATLRIGRRRSL

Enzyme Prediction     

No EC number prediction in MGYG000003145_00841.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH136	506	1027	5.5e-82	0.9938900203665988

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam05616	Neisseria_TspB	3.84e-08	1312	1376	324	391	Neisseria meningitidis TspB protein. This family consists of several Neisseria meningitidis TspB virulence factor proteins.
pfam05616	Neisseria_TspB	6.48e-08	1299	1377	321	398	Neisseria meningitidis TspB protein. This family consists of several Neisseria meningitidis TspB virulence factor proteins.
pfam13229	Beta_helix	2.88e-07	700	864	9	156	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
NF033845	MSCRAMM_ClfB	3.68e-07	1307	1362	536	591	MSCRAMM family adhesin clumping factor ClfB. Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
NF033839	PspC_subgroup_2	9.86e-07	1308	1438	427	556	pneumococcal surface protein PspC, LPXTG-anchored form. The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AOZ72967.1	7.00e-171	448	1307	26	842
QFU99648.1	2.44e-98	492	1305	30	773
QGN59088.1	5.83e-80	506	1107	38	585
QYX75179.1	4.15e-67	506	1220	37	689
QSY58188.1	5.05e-55	360	1198	164	990

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6KQT_A	5.91e-26	506	898	244	637	CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - native protein [Eubacterium ramulus ATCC 29099]
6KQS_A	2.23e-24	506	898	244	637	CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - selenomethionine derivative [Eubacterium ramulus ATCC 29099]
7V6I_A	1.51e-21	505	922	12	485	ChainA, Lacto-N-biosidase [Bifidobacterium saguini DSM 23967]
5GQC_A	5.36e-20	506	922	17	473	Crystalstructure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_C Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_D Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_E Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_F Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_G Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_H Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQF_A Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, lacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQF_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, lacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQG_A Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, galacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQG_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, galacto-N-biose complex [Bifidobacterium longum subsp. longum]
3F2Z_A	2.92e-06	270	410	16	136	Crystalstructure of the C-terminal domain of a chitobiase (BF3579) from Bacteroides fragilis, Northeast Structural Genomics Consortium Target BfR260B [Bacteroides fragilis NCTC 9343]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.026964	0.493768	0.002699	0.433515	0.042680	0.000349

TMHMM  Annotations     

start	end
25	47