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CAZyme Information: MGYG000003078_01643
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Collinsella sp900550815 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900550815 | |||||||||||
| CAZyme ID | MGYG000003078_01643 | |||||||||||
| CAZy Family | GH2 | |||||||||||
| CAZyme Description | Evolved beta-galactosidase subunit alpha | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 1507; End: 3831 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH2 | 14 | 638 | 8.3e-145 | 0.7340425531914894 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK10340 | ebgA | 0.0 | 12 | 769 | 245 | 1011 | cryptic beta-D-galactosidase subunit alpha; Reviewed |
| PRK09525 | lacZ | 5.41e-136 | 11 | 758 | 254 | 1026 | beta-galactosidase. |
| pfam02836 | Glyco_hydro_2_C | 5.53e-115 | 78 | 359 | 1 | 300 | Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. |
| COG3250 | LacZ | 3.41e-112 | 7 | 638 | 209 | 804 | Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]. |
| smart01038 | Bgal_small_N | 1.16e-90 | 486 | 756 | 4 | 272 | Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AZH69018.1 | 0.0 | 1 | 774 | 229 | 1002 |
| BAQ31796.1 | 0.0 | 2 | 774 | 230 | 1003 |
| QOL34338.1 | 0.0 | 2 | 774 | 231 | 1005 |
| VEP40598.1 | 0.0 | 2 | 759 | 229 | 1004 |
| AQX16063.1 | 0.0 | 2 | 759 | 229 | 1004 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6ETZ_A | 3.93e-111 | 45 | 757 | 263 | 986 | Cold-adaptedbeta-D-galactosidase from Arthrobacter sp. 32cB [Arthrobacter sp. 32cB],6H1P_A Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB - data collected at room temperature [Arthrobacter sp. 32cB] |
| 1YQ2_A | 5.52e-111 | 11 | 758 | 251 | 1023 | ChainA, beta-galactosidase [Arthrobacter sp. C2-2],1YQ2_B Chain B, beta-galactosidase [Arthrobacter sp. C2-2],1YQ2_C Chain C, beta-galactosidase [Arthrobacter sp. C2-2],1YQ2_D Chain D, beta-galactosidase [Arthrobacter sp. C2-2],1YQ2_E Chain E, beta-galactosidase [Arthrobacter sp. C2-2],1YQ2_F Chain F, beta-galactosidase [Arthrobacter sp. C2-2] |
| 6SEB_A | 5.90e-111 | 45 | 757 | 284 | 1007 | Cold-adaptedbeta-D-galactosidase from Arthrobacter sp. 32cB in complex with IPTG [Arthrobacter sp. 32cB],6SEC_A Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cBon complex with ONPG [Arthrobacter sp. 32cB],6SED_A Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB in complex with galactose [Arthrobacter sp. 32cB] |
| 6ZJV_A | 5.90e-111 | 45 | 757 | 284 | 1007 | Cold-adaptedbeta-D-galactosidase from Arthrobacter sp. 32cB mutant D207A [Arthrobacter sp. 32cB],6ZJW_A Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB mutant D207A in complex with galactose [Arthrobacter sp. 32cB],6ZJX_A Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB mutant D207A in complex with saccharose [Arthrobacter sp. 32cB] |
| 6SE8_A | 1.59e-110 | 45 | 757 | 284 | 1007 | Cold-adaptedbeta-D-galactosidase from Arthrobacter sp. 32cB mutant E441Q [Arthrobacter sp. 32cB],6SE9_A Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB mutant E441Q in complex with lactose bound in shallow mode [Arthrobacter sp. 32cB],6SEA_A Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB mutant E441Q in complex with lactose bound in deep mode [Arthrobacter sp. 32cB],6ZJS_A Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB mutant E441Q in complex with galactose [Arthrobacter sp. 32cB],6ZJT_A Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB mutant E441Q in complex with lactulose [Arthrobacter sp. 32cB],6ZJU_A Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB mutant E441Q in complex with saccharose [Arthrobacter sp. 32cB] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P06864 | 1.33e-247 | 2 | 769 | 229 | 1011 | Evolved beta-galactosidase subunit alpha OS=Escherichia coli (strain K12) OX=83333 GN=ebgA PE=1 SV=4 |
| O52847 | 2.62e-110 | 45 | 759 | 313 | 1034 | Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1 |
| A5F5U6 | 8.16e-110 | 35 | 762 | 292 | 1022 | Beta-galactosidase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) OX=345073 GN=lacZ PE=3 SV=2 |
| Q56307 | 3.35e-109 | 39 | 773 | 279 | 997 | Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2 |
| P00723 | 6.19e-107 | 45 | 756 | 299 | 1022 | Beta-galactosidase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=LAC4 PE=1 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000041 | 0.000022 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |