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CAZyme Information: MGYG000003073_01163
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Collinsella sp002232035 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp002232035 | |||||||||||
| CAZyme ID | MGYG000003073_01163 | |||||||||||
| CAZy Family | GH105 | |||||||||||
| CAZyme Description | 24.9 kDa protein in picA locus | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 11270; End: 11968 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH105 | 1 | 227 | 2.8e-70 | 0.6295180722891566 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4225 | YesR | 1.86e-61 | 1 | 225 | 139 | 352 | Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism]. |
| pfam07470 | Glyco_hydro_88 | 1.55e-46 | 1 | 227 | 133 | 340 | Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| CBK99741.1 | 1.77e-132 | 1 | 230 | 152 | 381 |
| AXB29657.1 | 7.18e-132 | 1 | 230 | 152 | 381 |
| AXA82451.1 | 7.18e-132 | 1 | 230 | 152 | 381 |
| CBL00657.1 | 7.18e-132 | 1 | 230 | 152 | 381 |
| ATP00557.1 | 1.02e-131 | 1 | 230 | 152 | 381 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4WU0_A | 2.01e-57 | 1 | 225 | 134 | 357 | StructuralAnalysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824],4WU0_B Structural Analysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824] |
| 2GH4_A | 1.85e-39 | 29 | 226 | 165 | 354 | ChainA, Putative glycosyl hydrolase yteR [Bacillus subtilis] |
| 1NC5_A | 2.25e-39 | 29 | 226 | 175 | 364 | Structureof Protein of Unknown Function of YteR from Bacillus Subtilis [Bacillus subtilis],2D8L_A Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc [Bacillus subtilis] |
| 4XUV_A | 9.05e-11 | 17 | 166 | 171 | 320 | Crystalstructure of a glycoside hydrolase family 105 (GH105) enzyme from Thielavia terrestris [Thermothielavioides terrestris NRRL 8126],4XUV_B Crystal structure of a glycoside hydrolase family 105 (GH105) enzyme from Thielavia terrestris [Thermothielavioides terrestris NRRL 8126] |
| 3QWT_A | 1.25e-10 | 25 | 165 | 197 | 327 | ChainA, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_B Chain B, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_C Chain C, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_D Chain D, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P0A3U6 | 8.42e-44 | 1 | 227 | 1 | 229 | Protein Atu3128 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=Atu3128 PE=3 SV=1 |
| P0A3U7 | 8.42e-44 | 1 | 227 | 1 | 229 | 24.9 kDa protein in picA locus OS=Rhizobium radiobacter OX=358 PE=2 SV=1 |
| O34559 | 1.23e-38 | 29 | 226 | 175 | 364 | Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) OX=224308 GN=yteR PE=1 SV=1 |
| O31521 | 4.20e-08 | 21 | 168 | 159 | 288 | Unsaturated rhamnogalacturonyl hydrolase YesR OS=Bacillus subtilis (strain 168) OX=224308 GN=yesR PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.999694 | 0.000306 | 0.000027 | 0.000001 | 0.000001 | 0.000007 |