You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000002877_01756
You are here: Home > Sequence: MGYG000002877_01756
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Prevotella sp900550365 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900550365 | |||||||||||
| CAZyme ID | MGYG000002877_01756 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 205; End: 1566 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 85 | 430 | 6.9e-59 | 0.916923076923077 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 5.86e-43 | 55 | 398 | 80 | 432 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| pfam00295 | Glyco_hydro_28 | 1.09e-14 | 132 | 327 | 32 | 197 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN02218 | PLN02218 | 4.78e-11 | 60 | 302 | 70 | 291 | polygalacturonase ADPG |
| PLN02188 | PLN02188 | 1.86e-09 | 12 | 300 | 5 | 252 | polygalacturonase/glycoside hydrolase family protein |
| PLN03003 | PLN03003 | 7.06e-09 | 153 | 361 | 112 | 287 | Probable polygalacturonase At3g15720 |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| BCS85035.1 | 2.79e-229 | 3 | 451 | 14 | 453 |
| ADE81705.1 | 7.15e-217 | 39 | 442 | 1 | 402 |
| QVJ82320.1 | 1.02e-216 | 39 | 442 | 1 | 402 |
| AGB29273.1 | 2.48e-209 | 15 | 451 | 9 | 437 |
| QIK53167.1 | 9.06e-182 | 33 | 451 | 29 | 440 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5OLP_A | 1.59e-30 | 56 | 333 | 43 | 327 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
| 3JUR_A | 1.74e-20 | 56 | 343 | 26 | 329 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
| 1BHE_A | 1.50e-10 | 74 | 427 | 26 | 362 | ChainA, POLYGALACTURONASE [Pectobacterium carotovorum] |
| 2UVE_A | 1.07e-06 | 60 | 202 | 159 | 300 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A7PZL3 | 1.22e-11 | 60 | 283 | 65 | 279 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
| Q7M1E7 | 2.89e-10 | 58 | 302 | 59 | 282 | Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1 |
| Q9FY19 | 3.78e-10 | 153 | 302 | 146 | 283 | Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1 |
| P26216 | 5.26e-10 | 55 | 302 | 38 | 260 | Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1 |
| P35336 | 6.15e-10 | 39 | 332 | 80 | 331 | Polygalacturonase OS=Actinidia deliciosa OX=3627 PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000343 | 0.998909 | 0.000239 | 0.000164 | 0.000161 | 0.000148 |