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CAZyme Information: MGYG000002852_01428
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Collinsella sp900543515 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900543515 | |||||||||||
| CAZyme ID | MGYG000002852_01428 | |||||||||||
| CAZy Family | CBM13 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 5994; End: 7943 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CBM13 | 505 | 646 | 7e-27 | 0.6968085106382979 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam14200 | RicinB_lectin_2 | 7.06e-20 | 543 | 632 | 2 | 89 | Ricin-type beta-trefoil lectin domain-like. |
| pfam14200 | RicinB_lectin_2 | 1.85e-15 | 503 | 584 | 10 | 89 | Ricin-type beta-trefoil lectin domain-like. |
| NF035929 | lectin_1 | 5.55e-12 | 469 | 644 | 675 | 836 | lectin. Lectins are important adhesin proteins, which bind carbohydrate structures on host cell surface. The carbohydrate specificity of diverse lectins to a large extent dictates bacteria tissue tropism by mediating specific attachment to unique host sites expressing the corresponding carbohydrate receptor. |
| cd00161 | RICIN | 1.22e-11 | 508 | 644 | 1 | 124 | Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture. |
| pfam00652 | Ricin_B_lectin | 1.25e-10 | 520 | 642 | 14 | 126 | Ricin-type beta-trefoil lectin domain. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AZH69735.1 | 1.02e-267 | 1 | 566 | 1 | 559 |
| ADQ05809.1 | 5.41e-10 | 243 | 377 | 937 | 1084 |
| BCS80083.1 | 5.50e-10 | 243 | 377 | 1085 | 1232 |
| ADQ03654.1 | 7.23e-10 | 243 | 377 | 1085 | 1232 |
| ADQ41898.1 | 9.50e-10 | 243 | 377 | 1090 | 1237 |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.014698 | 0.979444 | 0.004402 | 0.000848 | 0.000319 | 0.000255 |
