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CAZyme Information: MGYG000002845_00663

You are here: Home > Sequence: MGYG000002845_00663

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lachnoclostridium_B sp900543315
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnoclostridium_B; Lachnoclostridium_B sp900543315
CAZyme ID MGYG000002845_00663
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
863 94376.41 6.5223
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002845 2730908 MAG United States North America
Gene Location Start: 50411;  End: 53002  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002845_00663.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 327 440 6.3e-19 0.9453125

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4193 LytD 3.57e-20 274 451 53 238
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
COG5492 YjdB 5.65e-17 717 857 28 169
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
pfam07538 ChW 8.35e-17 616 650 1 35
Clostridial hydrophobic W. A novel extracellular macromolecular system has been proposed based on the proteins containing ChW repeats. ChW stands for Clostridial hydrophobic with conserved W (tryptophan). This repeat was originally described in Clostridium acetobutylicum but is also found in other Gram-positive bacteria including Enterococcus faecalis, Streptococcus agalactiae and Streptomyces coelicolor.
pfam07538 ChW 8.83e-16 766 800 1 35
Clostridial hydrophobic W. A novel extracellular macromolecular system has been proposed based on the proteins containing ChW repeats. ChW stands for Clostridial hydrophobic with conserved W (tryptophan). This repeat was originally described in Clostridium acetobutylicum but is also found in other Gram-positive bacteria including Enterococcus faecalis, Streptococcus agalactiae and Streptomyces coelicolor.
COG5492 YjdB 7.12e-15 564 698 25 160
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QEK17141.1 3.07e-150 87 569 35 510
AWY97555.1 1.99e-130 101 600 48 541
QPS13527.1 1.54e-112 104 547 76 513
QMW73215.1 1.54e-112 104 547 76 513
QOV20091.1 6.62e-112 99 547 40 477

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4Q2W_A 1.29e-28 183 449 59 290
CrystalStructure of pneumococcal peptidoglycan hydrolase LytB [Streptococcus pneumoniae TIGR4]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P59205 1.08e-27 183 449 427 658
Putative endo-beta-N-acetylglucosaminidase OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=lytB PE=1 SV=1
P59206 1.30e-27 183 449 471 702
Putative endo-beta-N-acetylglucosaminidase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) OX=171101 GN=lytB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.042450 0.612130 0.343178 0.001201 0.000604 0.000414

TMHMM  Annotations      download full data without filtering help

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