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CAZyme Information: MGYG000002817_01918

You are here: Home > Sequence: MGYG000002817_01918

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Paenibacillus_B sp900539405
Lineage Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus_B; Paenibacillus_B sp900539405
CAZyme ID MGYG000002817_01918
CAZy Family GT4
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
695 80651.58 5.9413
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002817 6425839 MAG United States North America
Gene Location Start: 171109;  End: 173196  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002817_01918.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13524 Glyco_trans_1_2 3.85e-14 240 331 1 93
Glycosyl transferases group 1.
COG4641 COG4641 1.06e-12 48 333 70 359
Spore maturation protein CgeB [Cell cycle control, cell division, chromosome partitioning].
pfam12996 DUF3880 1.11e-07 101 174 1 78
DUF based on E. rectale Gene description (DUF3880). Based on Eubacterium rectale gene EUBREC_3218. As seen in gene expression experiments (http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE14737), It appears to be upregulated in the presence of Bacteroides thetaiotaomicron vs when isolated in culture.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ABY97296.1 3.92e-120 16 635 1057 1682
AVH37490.1 4.13e-120 16 635 1096 1721
QHB26738.1 2.56e-119 16 635 920 1545
AYN14936.1 2.61e-119 16 635 1096 1721
BBU43919.1 2.61e-119 16 635 1096 1721

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000069 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002817_01918.