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CAZyme Information: MGYG000002786_01227
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | UMGS268 sp900540175 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Acholeplasmatales; Anaeroplasmataceae; UMGS268; UMGS268 sp900540175 | |||||||||||
| CAZyme ID | MGYG000002786_01227 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 25458; End: 26996 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 106 | 457 | 9e-73 | 0.9046153846153846 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 5.83e-104 | 8 | 506 | 9 | 538 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| PLN02793 | PLN02793 | 2.01e-27 | 76 | 392 | 53 | 342 | Probable polygalacturonase |
| PLN02218 | PLN02218 | 7.75e-27 | 65 | 452 | 55 | 407 | polygalacturonase ADPG |
| PLN03010 | PLN03010 | 1.36e-25 | 77 | 389 | 48 | 320 | polygalacturonase |
| pfam00295 | Glyco_hydro_28 | 3.17e-25 | 160 | 389 | 35 | 250 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| CCV65872.1 | 3.12e-217 | 1 | 508 | 1 | 508 |
| CCV64097.1 | 1.88e-214 | 3 | 509 | 4 | 513 |
| CDR31228.1 | 2.92e-195 | 2 | 511 | 1 | 510 |
| ABX43097.1 | 5.28e-195 | 4 | 508 | 5 | 514 |
| ARE86445.1 | 3.87e-193 | 3 | 512 | 4 | 521 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3JUR_A | 9.68e-43 | 80 | 389 | 32 | 362 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
| 5OLP_A | 3.34e-28 | 78 | 451 | 47 | 423 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
| 2UVE_A | 2.87e-23 | 46 | 399 | 116 | 510 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
| 4MR0_A | 4.01e-09 | 70 | 417 | 110 | 460 | Crystalstructure of PfbA, a surface adhesin of Streptococcus pneumoniae [Streptococcus pneumoniae R6],4MR0_B Crystal structure of PfbA, a surface adhesin of Streptococcus pneumoniae [Streptococcus pneumoniae R6] |
| 3ZPP_A | 9.26e-09 | 76 | 417 | 24 | 368 | Structureof the Streptococcus pneumoniae surface protein and adhesin PfbA [Streptococcus pneumoniae TIGR4] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P27644 | 8.27e-58 | 217 | 474 | 23 | 282 | Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1 |
| A7PZL3 | 7.40e-50 | 80 | 461 | 67 | 432 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
| P15922 | 1.36e-26 | 76 | 403 | 152 | 507 | Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1 |
| Q8RY29 | 1.92e-25 | 76 | 452 | 68 | 407 | Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2 |
| P26216 | 7.58e-24 | 77 | 456 | 42 | 383 | Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000099 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |