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CAZyme Information: MGYG000002785_00525

You are here: Home > Sequence: MGYG000002785_00525

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella;
CAZyme ID MGYG000002785_00525
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1028 116990.45 5.7513
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002785 1782446 MAG United States North America
Gene Location Start: 120;  End: 3206  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002785_00525.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4646 COG4646 4.30e-29 1 233 321 540
Adenine-specific DNA methylase, N12 class [Replication, recombination and repair].
COG4646 COG4646 1.36e-27 366 564 430 635
Adenine-specific DNA methylase, N12 class [Replication, recombination and repair].
smart00487 DEXDc 1.76e-09 177 280 7 110
DEAD-like helicases superfamily.
cd18011 DEXDc_RapA 3.82e-09 179 264 1 87
DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
pfam04851 ResIII 6.34e-09 176 265 1 100
Type III restriction enzyme, res subunit.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ASV45029.1 3.38e-220 1 968 2166 3186
QIW86704.1 9.75e-217 1 968 2234 3254
QIW86628.1 9.75e-217 1 968 2234 3254
AXF51455.1 1.27e-206 1 968 2399 3423
AEY69616.1 3.67e-205 1 968 2306 3330

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q71TF8 1.54e-23 129 740 784 1555
Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000055 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002785_00525.