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CAZyme Information: MGYG000002719_01332
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; HGM11514; HGM11514; ; | |||||||||||
| CAZyme ID | MGYG000002719_01332 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 2644; End: 4026 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 148 | 430 | 2.7e-38 | 0.6523076923076923 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 1.74e-23 | 115 | 330 | 114 | 367 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| pfam00295 | Glyco_hydro_28 | 3.04e-11 | 203 | 365 | 87 | 256 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN03010 | PLN03010 | 3.62e-09 | 199 | 330 | 155 | 308 | polygalacturonase |
| PLN02793 | PLN02793 | 9.63e-08 | 203 | 362 | 179 | 329 | Probable polygalacturonase |
| PLN03003 | PLN03003 | 7.57e-07 | 209 | 298 | 146 | 257 | Probable polygalacturonase At3g15720 |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AHF88976.1 | 2.21e-104 | 2 | 450 | 67 | 543 |
| QQR16514.1 | 3.10e-80 | 3 | 360 | 30 | 360 |
| ANU58578.2 | 4.18e-80 | 3 | 360 | 41 | 371 |
| QNN23865.1 | 2.69e-44 | 1 | 334 | 37 | 344 |
| ASV74723.1 | 1.69e-43 | 2 | 363 | 36 | 369 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3JUR_A | 2.14e-06 | 150 | 439 | 117 | 420 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P49062 | 4.12e-09 | 203 | 358 | 171 | 352 | Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana OX=3702 GN=PGA3 PE=2 SV=1 |
| Q94AJ5 | 1.35e-08 | 203 | 362 | 179 | 329 | Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana OX=3702 GN=At1g80170 PE=1 SV=1 |
| P24548 | 1.39e-08 | 122 | 374 | 26 | 269 | Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1 |
| Q9SFB7 | 5.50e-08 | 203 | 365 | 195 | 357 | Polygalacturonase QRT2 OS=Arabidopsis thaliana OX=3702 GN=QRT2 PE=1 SV=2 |
| Q9LW07 | 4.09e-07 | 203 | 346 | 140 | 275 | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000057 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |