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CAZyme Information: MGYG000002668_01507

You are here: Home > Sequence: MGYG000002668_01507

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900552965
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900552965
CAZyme ID MGYG000002668_01507
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
487 MGYG000002668_203|CGC1 52983.64 7.3714
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002668 2820424 MAG United Republic of Tanzania Africa
Gene Location Start: 2287;  End: 3750  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002668_01507.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 51 403 4e-60 0.9353846153846154

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.21e-63 20 473 76 514
Polygalacturonase [Carbohydrate transport and metabolism].
pfam12708 Pectate_lyase_3 4.53e-13 27 99 2 78
Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
pfam00295 Glyco_hydro_28 2.63e-11 122 366 45 268
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02218 PLN02218 1.49e-10 28 421 69 429
polygalacturonase ADPG
PLN02793 PLN02793 4.01e-10 27 249 53 268
Probable polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AGB28085.1 4.20e-248 4 472 1 466
QEC63468.1 5.89e-136 27 473 26 463
AGA77909.1 2.93e-135 14 469 22 493
QDH78953.1 2.00e-132 27 472 27 488
QEC74399.1 1.24e-130 25 478 38 488

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3JUR_A 4.14e-32 20 398 21 411
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
4MXN_A 1.54e-26 26 263 21 241
Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184]
5OLP_A 1.85e-26 26 397 44 425
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
2UVE_A 2.57e-13 28 149 158 279
Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica]
3GQ7_A 3.28e-08 5 393 1 327
ChainA, Preneck appendage protein [Salasvirus phi29],3GQ8_A Chain A, Preneck appendage protein [Salasvirus phi29],3GQ9_A Chain A, Preneck appendage protein [Salasvirus phi29],3GQA_A Chain A, Preneck appendage protein [Salasvirus phi29]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7PZL3 1.92e-11 28 303 64 357
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
P15922 4.07e-11 28 370 153 524
Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1
Q8RY29 6.53e-10 28 421 69 429
Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2
Q9ZFG9 1.71e-08 26 214 2 200
Alginate lyase 7 OS=Azotobacter vinelandii OX=354 GN=algE7 PE=1 SV=1
P35336 1.13e-07 28 405 91 436
Polygalacturonase OS=Actinidia deliciosa OX=3627 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000254 0.999084 0.000178 0.000163 0.000155 0.000147

TMHMM  Annotations      download full data without filtering help

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