logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002621_01438

You are here: Home > Sequence: MGYG000002621_01438

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides ndongoniae
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides ndongoniae
CAZyme ID MGYG000002621_01438
CAZy Family GH136
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
522 MGYG000002621_12|CGC1 58296.67 5.8158
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002621 3633256 MAG China Asia
Gene Location Start: 31087;  End: 32655  Strand: +

Full Sequence      Download help

MKKTRIRFEQ  HKLTLITGLL  ILASCISGGV  QLSSCTADSH  TAYYIDPVAG  NDANSGRSAD60
KAWQSLKKVK  EITLAPGEQV  LLKRGATFNG  QLEINGKGTP  AQPVIVGAYG  DETLPKPCIV120
GDETSLYAVR  IFNSEYLTMR  DLEIVNTGKQ  PLPLRTGLKI  ECRDYGVAHN  ICIDGLTIRD180
VNGSPVKELG  GGSGIYIVNE  GEQIRSCFDS  LVIQNCHIMR  CTRNAMIWKG  YYDRRNWFPS240
KHTVVRYNLI  EEVPGDGIVP  IGCDSTLIEY  NVMRNCPDVL  PMTEAAAGFW  PWSCDNTTIQ300
FNHVSDHKAP  WDAQAYDCDY  NCTNTVIQYN  YSHDNYGGLV  LVCDSGNERD  YSLGNQRSIV360
RYNISIGDGI  RPKPTRQGMF  SPSIHIAGQV  EDTRIERNII  HANVKPGKDI  DRSMIVSDSW420
DGYAARTTFS  QNIFYTAEPS  RFDLTKSTDN  TFSGNWYLGN  YTALPDDPEA  KTACQQYEEQ480
ILSAGSDGRH  GLEKLMKQRD  VCGTSFLFID  KDRIETFFEQ  LQ522

Enzyme Prediction      help

No EC number prediction in MGYG000002621_01438.

CAZyme Signature Domains help

Created with Snap26527810413015618220823426128731333936539141744346949540478GH136
Family Start End Evalue family coverage
GH136 40 478 2e-92 0.8737270875763747

CDD Domains      download full data without filtering help

Created with Snap265278104130156182208234261287313339365391417443469495127308Beta_helix193348Beta_helix
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13229 Beta_helix 4.76e-04 127 308 1 138
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam13229 Beta_helix 0.003 193 348 1 126
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits      help

Created with Snap26527810413015618220823426128731333936539141744346949537522ABR38308.1|GH13637522QQY39407.1|GH13632522QEW35088.1|GH13632522ALK82684.1|GH13632522QUT56379.1|GH136
Hit ID E-Value Query Start Query End Hit Start Hit End
ABR38308.1 1.48e-208 37 522 18 503
QQY39407.1 1.48e-208 37 522 18 503
QEW35088.1 2.97e-208 32 522 14 503
ALK82684.1 2.97e-208 32 522 14 503
QUT56379.1 2.97e-208 32 522 14 503

PDB Hits      download full data without filtering help

Created with Snap265278104130156182208234261287313339365391417443469495433836KQT_A433836KQS_A414707V6M_A304617V6I_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
6KQT_A 2.37e-36 43 383 247 625
CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - native protein [Eubacterium ramulus ATCC 29099]
6KQS_A 8.89e-35 43 383 247 625
CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - selenomethionine derivative [Eubacterium ramulus ATCC 29099]
7V6M_A 2.02e-33 41 470 9 493
ChainA, Fibronectin type III domain-containing protein [Tyzzerella nexilis]
7V6I_A 4.26e-24 30 461 1 503
ChainA, Lacto-N-biosidase [Bifidobacterium saguini DSM 23967]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.002503 0.434543 0.562131 0.000326 0.000265 0.000220

TMHMM  Annotations      download full data without filtering help

start end
13 35