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CAZyme Information: MGYG000002621_00478

You are here: Home > Sequence: MGYG000002621_00478

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides ndongoniae
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides ndongoniae
CAZyme ID MGYG000002621_00478
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
483 MGYG000002621_3|CGC4 53896.52 8.6083
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002621 3633256 MAG China Asia
Gene Location Start: 171339;  End: 172790  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002621_00478.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 184 450 5.2e-31 0.7784615384615384

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 0.010 223 332 237 347
Polygalacturonase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ALJ62060.1 5.64e-269 1 482 17 490
QUT92189.1 5.64e-269 1 482 17 490
QDO69870.1 1.21e-266 1 482 1 474
QUT34116.1 1.60e-264 1 482 1 483
QUU00182.1 3.39e-259 1 482 1 483

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.022231 0.963334 0.013241 0.000466 0.000349 0.000361

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002621_00478.