CAZyme Information: MGYG000002613_00911

Basic Information

• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella
• CAZyme ID: MGYG000002613_00911
• CAZy Family: PL11
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1172		125385.73	5.0141

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002613	2968338	MAG	China	Asia

• Gene Location: Start: 18548; End: 22066 Strand: -

Full Sequence      

MIAYDVDPATHSLKERWRWFNNTNGPWKGQGYHNYGIADVDWDGRDEIVFGSMVIDDNGK
GLSTTGLGHGDAQHCSDFNPYIHGQEIYACNEDRPGNNYRDATTSKIYHRFNAGNDDGRA
MCGNFTDEYPGALGCSAREGAISTVTNGAISGMDATGVNTNFRIYWDGDLCEESFNYVSG
KNTAGGIYKYGSWNPIYTCDGSMTNNDTKGTPCYQGDILGDWREEIIMRTADNNIRIYST
PTPTEYRNYSLWHDHQYRNAMVWQMCGYNQPPHVSYFLGKLEGITIAPPPLTTTGRTEVG
NGGSVASGLNDKHVLVYENANINVNIENGAKPYILTFNVPTWVQGSAPSEASSSSYRITY
DTYTCTVTGGGISGDARLVKQGDGILSLPKADFTHTGNTDIWAGVVNFDGTMRNSPVWLN
RFAELNSNGGIFRSIKMDYDSRLRPGGEGTVGTITTDSLMLGFGSRIVFDVNGENIQADN
IKAKLFTIETKDWKYGPEYLVPVFEFSVSGGLAEGKYLIGTFDKVEGNISDIKLLGLDNK
KKCALELEGTNLYLVVYGLRDATTVVWTGSESSVWDVANTENFALASDQSTVNFVNGDKV
IFDDNATSKTITLDAEVEADSIIFDNNTSYTLNGAGAITGNTVLVKRGIGTTTIATTNTF
TGGTRVSGGILSVRSLANDITPSGNLGGNTVLADKMVVENGATLRNTAAVTQGSPMKMAG
DEGGIIEAFYDFTANKSISGTMLTKKGSGGLIFKTNNTMLNKLVVVAGTVTNSGSTYPAK
AVELQGGTLQETAGTSYPINVPKAKTARWNLENRSTYSNKITGEGTLTIYCPLVDGGSWM
AARTPVKCNFSEFTGILKPAVPSKDYRFTLDNNSGMPNGTMDIAAGIEVQNSGKTFQIGK
VTGSGDLGGVCTFSSGAASGSNTWKVGNETNFKWSGKVTGTGTSFIKVGSGKLTVDGVWD
NTGTVRVSEGELAVASGKKLGTGVLIIDEGARLSGITGSGSIDNSAVTVNGEVCPGAYPK
ATTGSIGFGGKNVTFSSTGRLIVWKGGFNNTTLSDINKLTMNGTIEVNLSASYTPKDGDT
MTLWTATSFAGTPNLVLPELEIGMKWDTSRIAEGVLSIYYDPTGIDGISSDVNVNTNDIY
NMNGQLVRKNATSAEGLPRGIYFRNGKKIVVK

Enzyme Prediction     

No EC number prediction in MGYG000002613_00911.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL11	3	280	6.6e-82	0.4734133790737564

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd10318	RGL11	9.29e-85	3	276	293	564	Rhamnogalacturonan lyase of the polysaccharide lyase family 11. The rhamnogalacturonan lyase of the polysaccharide lyase family 11 (RGL11) cleaves glycoside bonds in polygalacturonan as well as RG (rhamnogalacturonan) type-I through a beta-elimination reaction. Functionally characterized members of this family, YesW and YesX from Bacillus subtilis, cleave glycoside bonds between rhamnose and galacturonic acid residues in the RG-I region of plant cell wall pectin. YesW and YesX work synergistically, with YesW cleaving the glycoside bond of the RG chain endolytically, and YesX converting the resultant oligosaccharides through an exotype reaction. This domain is sometimes found in architectures with non-catalytic carbohydrate-binding modules (CBMs). There are two types of RG lyases, which both cleave the alpha-1,4 bonds of the RG-I main chain through a beta-elimination reaction, but belong to two structurally unrelated polysaccharide lyase (PL) families, 4 and 11.
PRK15319	PRK15319	1.53e-06	706	1088	588	971	fibronectin-binding autotransporter adhesin ShdA.
PRK15319	PRK15319	2.27e-05	640	1082	621	1028	fibronectin-binding autotransporter adhesin ShdA.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QIM09959.1	1.24e-306	2	1163	322	1525
AGB29439.1	5.63e-226	1	1172	338	1515
BCS86257.1	1.42e-169	1	556	326	866
QJE98692.1	1.55e-69	13	986	328	1319
AKC82987.1	1.86e-69	7	957	331	1287

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
2Z8R_A	1.31e-57	1	290	294	578	Crystalstructure of rhamnogalacturonan lyase YesW at 1.40 A resolution [Bacillus subtilis],2Z8R_B Crystal structure of rhamnogalacturonan lyase YesW at 1.40 A resolution [Bacillus subtilis],2Z8S_A Crystal structure of rhamnogalacturonan lyase YesW complexed with digalacturonic acid [Bacillus subtilis],2Z8S_B Crystal structure of rhamnogalacturonan lyase YesW complexed with digalacturonic acid [Bacillus subtilis],2ZUX_A Crystal structure of rhamnogalacturonan lyase YesW complexed with rhamnose [Bacillus subtilis],2ZUX_B Crystal structure of rhamnogalacturonan lyase YesW complexed with rhamnose [Bacillus subtilis]
4CAG_A	5.74e-52	1	280	301	577	Bacilluslicheniformis Rhamnogalacturonan Lyase PL11 [Bacillus licheniformis]
2ZUY_A	6.88e-51	1	290	298	599	Crystalstructure of exotype rhamnogalacturonan lyase YesX [Bacillus subtilis]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
O31526	1.23e-56	1	290	331	615	Rhamnogalacturonan endolyase YesW OS=Bacillus subtilis (strain 168) OX=224308 GN=yesW PE=1 SV=1
O31527	3.31e-50	1	290	298	599	Rhamnogalacturonan exolyase YesX OS=Bacillus subtilis (strain 168) OX=224308 GN=yesX PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000065	0.000001	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002613_00911.