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CAZyme Information: MGYG000002601_00946
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | CAG-110 sp900549705 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Oscillospiraceae; CAG-110; CAG-110 sp900549705 | |||||||||||
| CAZyme ID | MGYG000002601_00946 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 21239; End: 26755 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4646 | COG4646 | 2.04e-83 | 544 | 1070 | 1 | 540 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| COG4646 | COG4646 | 1.38e-28 | 1213 | 1402 | 441 | 637 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| COG0827 | YtxK | 6.01e-11 | 341 | 521 | 168 | 341 | Adenine-specific DNA methylase [Replication, recombination and repair]. |
| smart00487 | DEXDc | 5.18e-10 | 1014 | 1117 | 7 | 110 | DEAD-like helicases superfamily. |
| cd18011 | DEXDc_RapA | 1.13e-09 | 1016 | 1264 | 1 | 173 | DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ASV45029.1 | 0.0 | 246 | 1759 | 1540 | 3142 |
| QIW86704.1 | 0.0 | 246 | 1821 | 1608 | 3258 |
| QIW86628.1 | 0.0 | 246 | 1821 | 1608 | 3258 |
| AEY69616.1 | 0.0 | 245 | 1828 | 1680 | 3354 |
| AXF51455.1 | 0.0 | 245 | 1828 | 1773 | 3447 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q71TF8 | 1.30e-34 | 271 | 1587 | 51 | 1567 | Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1 |
| P52284 | 2.24e-07 | 339 | 543 | 26 | 241 | Type II methyltransferase M.CvrRI OS=Paramecium bursaria Chlorella virus XZ-6E OX=36360 GN=CVIRIM PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000032 | 0.000004 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |