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CAZyme Information: MGYG000002580_02452
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Lachnospira sp000436475 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnospira; Lachnospira sp000436475 | |||||||||||
| CAZyme ID | MGYG000002580_02452 | |||||||||||
| CAZy Family | PL1 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 33418; End: 39810 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CE8 | 1655 | 1938 | 7.8e-83 | 0.9618055555555556 |
| PL1 | 116 | 311 | 5.5e-65 | 0.9890710382513661 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4677 | PemB | 1.47e-47 | 1659 | 1939 | 94 | 402 | Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism]. |
| PLN02773 | PLN02773 | 4.38e-46 | 1659 | 1933 | 17 | 290 | pectinesterase |
| PLN02682 | PLN02682 | 1.65e-42 | 1653 | 1915 | 73 | 334 | pectinesterase family protein |
| pfam01095 | Pectinesterase | 2.66e-40 | 1659 | 1935 | 12 | 291 | Pectinesterase. |
| PLN02665 | PLN02665 | 2.35e-39 | 1609 | 1915 | 34 | 327 | pectinesterase family protein |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QYR21100.1 | 1.09e-254 | 23 | 823 | 10 | 832 |
| AIQ73887.1 | 2.69e-241 | 53 | 830 | 46 | 840 |
| AWV33235.1 | 1.26e-240 | 53 | 830 | 52 | 846 |
| AOZ92378.1 | 7.06e-213 | 50 | 1935 | 343 | 2132 |
| QNF31079.1 | 3.21e-188 | 49 | 823 | 23 | 748 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3UW0_A | 7.89e-45 | 1659 | 1939 | 44 | 358 | Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081] |
| 2NSP_A | 8.10e-43 | 1654 | 1934 | 13 | 329 | ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937] |
| 1QJV_A | 8.64e-38 | 1654 | 1934 | 13 | 329 | ChainA, PECTIN METHYLESTERASE [Dickeya chrysanthemi],1QJV_B Chain B, PECTIN METHYLESTERASE [Dickeya chrysanthemi] |
| 2NTB_A | 2.92e-37 | 1654 | 1934 | 13 | 329 | Crystalstructure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTB_B Crystal structure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTP_A Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTP_B Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTQ_A Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937],2NTQ_B Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937] |
| 5C1E_A | 1.72e-31 | 1659 | 1937 | 19 | 288 | CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q5B297 | 5.96e-45 | 54 | 493 | 20 | 411 | Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1 |
| B8NQQ7 | 1.32e-42 | 54 | 493 | 20 | 414 | Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1 |
| Q2UB83 | 2.42e-42 | 54 | 493 | 20 | 414 | Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1 |
| Q0CLG7 | 8.11e-42 | 54 | 493 | 20 | 414 | Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1 |
| A1DPF0 | 1.52e-41 | 46 | 493 | 13 | 415 | Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.012968 | 0.984511 | 0.000746 | 0.001249 | 0.000279 | 0.000226 |
