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CAZyme Information: MGYG000002573_00628
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Ruminococcus_C sp900545285 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus_C; Ruminococcus_C sp900545285 | |||||||||||
| CAZyme ID | MGYG000002573_00628 | |||||||||||
| CAZy Family | CBM22 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 39794; End: 41851 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH10 | 193 | 530 | 7.1e-102 | 0.9933993399339934 |
| CBM22 | 38 | 165 | 5e-24 | 0.9694656488549618 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00331 | Glyco_hydro_10 | 7.95e-112 | 194 | 530 | 1 | 310 | Glycosyl hydrolase family 10. |
| smart00633 | Glyco_10 | 5.27e-107 | 236 | 528 | 1 | 263 | Glycosyl hydrolase family 10. |
| COG3693 | XynA | 2.00e-76 | 204 | 530 | 36 | 339 | Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism]. |
| pfam02018 | CBM_4_9 | 3.27e-16 | 36 | 165 | 1 | 129 | Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. |
| cd14256 | Dockerin_I | 2.15e-13 | 618 | 674 | 1 | 57 | Type I dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type I dockerins, which are responsible for anchoring a variety of enzymatic domains to the complex. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| CBL16579.1 | 2.04e-243 | 1 | 678 | 1 | 630 |
| CAB65753.1 | 1.63e-191 | 34 | 533 | 29 | 533 |
| CAL91979.1 | 5.91e-182 | 28 | 533 | 18 | 526 |
| CAL91978.1 | 4.21e-166 | 72 | 533 | 3 | 466 |
| ADU21885.1 | 2.17e-152 | 1 | 537 | 1 | 545 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2W5F_A | 1.54e-99 | 68 | 528 | 52 | 524 | ChainA, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],2W5F_B Chain B, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus] |
| 2WYS_A | 2.89e-95 | 101 | 528 | 85 | 524 | ChainA, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],2WYS_B Chain B, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],2WZE_A Chain A, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],2WZE_B Chain B, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus] |
| 6FHE_A | 2.41e-68 | 188 | 529 | 7 | 339 | Highlyactive enzymes by automated modular backbone assembly and sequence design [synthetic construct] |
| 7NL2_A | 3.75e-66 | 186 | 532 | 4 | 341 | ChainA, Beta-xylanase [Pseudothermotoga thermarum DSM 5069],7NL2_B Chain B, Beta-xylanase [Pseudothermotoga thermarum DSM 5069] |
| 6D5C_A | 1.87e-65 | 191 | 530 | 20 | 349 | Structureof Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5C_B Structure of Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5C_C Structure of Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P29126 | 3.28e-104 | 193 | 529 | 629 | 950 | Bifunctional endo-1,4-beta-xylanase XylA OS=Ruminococcus flavefaciens OX=1265 GN=xynA PE=3 SV=1 |
| P51584 | 9.75e-95 | 68 | 528 | 63 | 535 | Endo-1,4-beta-xylanase Y OS=Acetivibrio thermocellus OX=1515 GN=xynY PE=1 SV=1 |
| Q60037 | 1.33e-78 | 38 | 529 | 205 | 690 | Endo-1,4-beta-xylanase A OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=xynA PE=1 SV=1 |
| Q60042 | 3.32e-78 | 38 | 529 | 200 | 686 | Endo-1,4-beta-xylanase A OS=Thermotoga neapolitana OX=2337 GN=xynA PE=1 SV=1 |
| P36917 | 7.87e-68 | 25 | 530 | 184 | 674 | Endo-1,4-beta-xylanase A OS=Thermoanaerobacterium saccharolyticum OX=28896 GN=xynA PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000394 | 0.998789 | 0.000234 | 0.000215 | 0.000186 | 0.000166 |