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CAZyme Information: MGYG000002573_00214

You are here: Home > Sequence: MGYG000002573_00214

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Ruminococcus_C sp900545285
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus_C; Ruminococcus_C sp900545285
CAZyme ID MGYG000002573_00214
CAZy Family CBM4
CAZyme Description Cellulose 1,4-beta-cellobiosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
876 94860.5 4.0971
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002573 2234911 MAG China Asia
Gene Location Start: 62994;  End: 65624  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.4

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH9 299 784 5.3e-120 0.9904306220095693
CBM4 31 172 1.2e-27 0.9761904761904762

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00759 Glyco_hydro_9 3.18e-86 302 784 2 373
Glycosyl hydrolase family 9.
cd02850 E_set_Cellulase_N 1.58e-29 210 293 2 86
N-terminal Early set domain associated with the catalytic domain of cellulase. E or "early" set domains are associated with the catalytic domain of cellulases at the N-terminal end. Cellulases are O-glycosyl hydrolases (GHs) that hydrolyze beta 1-4 glucosidic bonds in cellulose. They are usually categorized into either exoglucanases, which sequentially release terminal sugar units from the cellulose chain, or endoglucanases, which also attack the chain internally. The N-terminal domain of cellulase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others.
pfam02927 CelD_N 4.67e-25 208 288 1 83
Cellulase N-terminal ig-like domain.
PLN02345 PLN02345 2.20e-11 360 736 39 425
endoglucanase
PLN02340 PLN02340 7.06e-11 360 742 73 468
endoglucanase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADU21576.1 0.0 7 874 8 900
CBL17684.1 8.20e-276 11 790 21 860
QTL97152.1 1.10e-250 28 796 38 813
BCZ47860.1 1.35e-243 14 812 8 816
QNU67291.1 1.44e-242 26 788 38 788

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1UT9_A 2.67e-171 209 788 6 604
ChainA, CELLULOSE 1,4-BETA-CELLOBIOSIDASE [Acetivibrio thermocellus]
1RQ5_A 3.08e-170 209 788 6 604
ChainA, Cellobiohydrolase [Acetivibrio thermocellus]
3X17_A 1.92e-74 208 784 16 552
Crystalstructure of metagenome-derived glycoside hydrolase family 9 endoglucanase [uncultured bacterium],3X17_B Crystal structure of metagenome-derived glycoside hydrolase family 9 endoglucanase [uncultured bacterium]
6DHT_A 6.95e-68 213 788 21 564
Bacteroidesovatus GH9 Bacova_02649 [Bacteroides ovatus ATCC 8483]
5U0H_A 2.42e-60 223 794 7 546
Crystalstructure of GH family 9 endoglucanase J30 [Thermobacillus composti KWC4]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P0C2S1 3.51e-200 23 788 35 811
Cellulose 1,4-beta-cellobiosidase OS=Acetivibrio thermocellus OX=1515 GN=celK PE=1 SV=1
A3DCH1 9.87e-200 23 788 35 811
Cellulose 1,4-beta-cellobiosidase OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=celK PE=3 SV=1
P14090 1.62e-152 31 790 185 909
Endoglucanase C OS=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) OX=590998 GN=cenC PE=1 SV=2
Q05156 1.73e-149 1 790 1 744
Cellulase 1 OS=Streptomyces reticuli OX=1926 GN=cel1 PE=1 SV=1
P10476 1.68e-141 213 790 40 600
Endoglucanase A OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=celA PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000407 0.312736 0.686306 0.000257 0.000147 0.000125

TMHMM  Annotations      download full data without filtering help

start end
849 868