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CAZyme Information: MGYG000002554_01334
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Streptococcus oralis_W | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus oralis_W | |||||||||||
| CAZyme ID | MGYG000002554_01334 | |||||||||||
| CAZy Family | GT0 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 16; End: 1614 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam05045 | RgpF | 0.0 | 5 | 463 | 19 | 500 | Rhamnan synthesis protein F. This family consists of a group of proteins which are related to the Streptococcus rhamnose-glucose polysaccharide assembly protein (RgpF). Rhamnan backbones are found in several O polysaccharides of phytopathogenic bacteria and are regarded as pathogenic factors. |
| COG3754 | RgpF | 2.56e-180 | 5 | 528 | 52 | 590 | Lipopolysaccharide biosynthesis protein [Cell wall/membrane/envelope biogenesis]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QEW09567.1 | 0.0 | 1 | 532 | 50 | 581 |
| VED88876.1 | 0.0 | 1 | 532 | 50 | 581 |
| VEE19593.1 | 0.0 | 1 | 532 | 50 | 581 |
| VED67427.1 | 0.0 | 1 | 532 | 50 | 581 |
| QBS00304.1 | 0.0 | 1 | 532 | 50 | 581 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P55470 | 6.39e-10 | 10 | 142 | 133 | 264 | Uncharacterized protein y4gN OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=394 GN=NGR_a03500 PE=4 SV=1 |
| B0RVK2 | 2.01e-09 | 239 | 457 | 450 | 659 | Uncharacterized protein WxcX OS=Xanthomonas campestris pv. campestris (strain B100) OX=509169 GN=wxcX PE=4 SV=1 |
| P0C7J1 | 6.11e-09 | 239 | 457 | 450 | 659 | Uncharacterized protein WxcX OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) OX=190485 GN=wxcX PE=4 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000024 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |