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CAZyme Information: MGYG000002537_01082
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Kocuria rhizophila | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Micrococcaceae; Kocuria; Kocuria rhizophila | |||||||||||
| CAZyme ID | MGYG000002537_01082 | |||||||||||
| CAZy Family | CBM48 | |||||||||||
| CAZyme Description | 1,4-alpha-glucan branching enzyme GlgB | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 428; End: 4765 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH13 | 977 | 1277 | 6.1e-163 | 0.9966777408637874 |
| CBM48 | 827 | 915 | 5.4e-20 | 0.881578947368421 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK12313 | PRK12313 | 0.0 | 805 | 1428 | 5 | 629 | 1,4-alpha-glucan branching protein GlgB. |
| PRK14706 | PRK14706 | 0.0 | 826 | 1439 | 26 | 634 | glycogen branching enzyme; Provisional |
| PRK14705 | PRK14705 | 0.0 | 10 | 1428 | 14 | 1224 | glycogen branching enzyme; Provisional |
| COG0296 | GlgB | 0.0 | 802 | 1426 | 1 | 628 | 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]. |
| PRK05402 | PRK05402 | 0.0 | 707 | 1429 | 1 | 726 | 1,4-alpha-glucan branching protein GlgB. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QTK31132.1 | 0.0 | 1 | 1445 | 1 | 1443 |
| VEH74522.1 | 0.0 | 1 | 1432 | 1 | 1375 |
| BAG30210.1 | 0.0 | 1 | 1432 | 1 | 1375 |
| ASE12024.1 | 0.0 | 1 | 1432 | 1 | 1375 |
| QMS56518.1 | 0.0 | 1 | 1436 | 1 | 1378 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3K1D_A | 0.0 | 705 | 1427 | 4 | 722 | Crystalstructure of glycogen branching enzyme synonym: 1,4-alpha-D-glucan:1,4-alpha-D-GLUCAN 6-glucosyl-transferase from mycobacterium tuberculosis H37RV [Mycobacterium tuberculosis H37Rv] |
| 5GR1_A | 1.22e-242 | 720 | 1425 | 38 | 772 | Crystalstructure of branching enzyme Y500A/D501A mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142],5GR6_A Crystal structure of branching enzyme Y500A/D501A double mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142] |
| 5GR0_A | 3.41e-242 | 720 | 1425 | 38 | 772 | Crystalstructure of branching enzyme D501A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142] |
| 5GQZ_A | 9.54e-242 | 720 | 1425 | 38 | 772 | Crystalstructure of branching enzyme Y500A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142] |
| 5GQW_A | 9.54e-242 | 720 | 1425 | 38 | 772 | Crystalstructure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQX_A Crystal structure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q5Z0W8 | 0.0 | 704 | 1424 | 23 | 739 | 1,4-alpha-glucan branching enzyme GlgB OS=Nocardia farcinica (strain IFM 10152) OX=247156 GN=glgB PE=3 SV=1 |
| P9WN44 | 0.0 | 705 | 1427 | 13 | 731 | 1,4-alpha-glucan branching enzyme GlgB OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=glgB PE=3 SV=1 |
| P9WN45 | 0.0 | 705 | 1427 | 13 | 731 | 1,4-alpha-glucan branching enzyme GlgB OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=glgB PE=1 SV=1 |
| Q0SGR9 | 0.0 | 712 | 1424 | 16 | 728 | 1,4-alpha-glucan branching enzyme GlgB OS=Rhodococcus jostii (strain RHA1) OX=101510 GN=glgB PE=3 SV=1 |
| Q2J6Q9 | 0.0 | 712 | 1427 | 96 | 812 | 1,4-alpha-glucan branching enzyme GlgB OS=Frankia casuarinae (strain DSM 45818 / CECT 9043 / CcI3) OX=106370 GN=glgB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000033 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |