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CAZyme Information: MGYG000002537_00685

You are here: Home > Sequence: MGYG000002537_00685

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Kocuria rhizophila
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Micrococcaceae; Kocuria; Kocuria rhizophila
CAZyme ID MGYG000002537_00685
CAZy Family GH15
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
700 MGYG000002537_4|CGC2 77484.14 4.5419
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002537 2636961 Isolate India Asia
Gene Location Start: 158092;  End: 160194  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002537_00685.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH15 311 687 4.1e-55 0.9861495844875346

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3387 SGA1 2.60e-87 1 699 12 612
Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family [Carbohydrate transport and metabolism].
pfam00723 Glyco_hydro_15 1.28e-48 311 687 5 415
Glycosyl hydrolases family 15. In higher organisms this family is represented by phosphorylase kinase subunits.
TIGR00860 LIC 0.009 219 258 71 110
Cation transporter family protein. The Ligand-gated Ion Channel (LIC) Family of Neurotransmitter Receptors TC 1.A.9)Members of the LIC family of ionotropic neurotransmitter receptors are found only in vertebrate and invertebrate animals. They exhibit receptor specificity for (1)acetylcholine, (2) serotonin, (3) glycine, (4) glutamate and (5) g-aminobutyric acid (GABA). All of these receptor channels are probably hetero- orhomopentameric. The best characterized are the nicotinic acetyl-choline receptors which are pentameric channels of a2bgd subunit composition. All subunits arehomologous. The three dimensional structures of the protein complex in both the open and closed configurations have been solved at 0.9 nm resolution.The channel protein complexes of the LIC family preferentially transport cations or anions depending on the channel (e.g., the acetylcholine receptors are cationselective while glycine receptors are anion selective). [Transport and binding proteins, Cations and iron carrying compounds]

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QTK31691.1 0.0 1 700 1 700
AVJ53395.1 0.0 1 700 1 700
VEH76227.1 0.0 1 700 1 700
BAG28479.1 0.0 1 700 1 700
QMS55880.1 0.0 1 694 1 694

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q978S7 5.16e-77 4 692 29 611
Trehalase OS=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) OX=273116 GN=TVG1381191 PE=1 SV=1
Q9HLE2 2.00e-76 19 692 2 569
Trehalase OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) OX=273075 GN=Ta0286 PE=1 SV=1
A0R0W9 9.16e-68 5 700 42 658
Trehalase OS=Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) OX=246196 GN=MSMEG_4535 PE=1 SV=1
P71741 2.19e-67 5 700 54 670
Trehalase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv2402 PE=1 SV=2
Q4J9D4 5.57e-49 7 692 2 571
Trehalase 2 OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) OX=330779 GN=treH2 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000023 0.000014 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002537_00685.