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CAZyme Information: MGYG000002534_05293
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Citrobacter_A farmeri | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter_A; Citrobacter_A farmeri | |||||||||||
| CAZyme ID | MGYG000002534_05293 | |||||||||||
| CAZy Family | GH2 | |||||||||||
| CAZyme Description | Beta-glucuronidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 20060; End: 21871 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH2 | 7 | 593 | 5.9e-106 | 0.6210106382978723 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3250 | LacZ | 0.0 | 1 | 602 | 1 | 609 | Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]. |
| PRK10150 | PRK10150 | 0.0 | 1 | 600 | 1 | 604 | beta-D-glucuronidase; Provisional |
| pfam02836 | Glyco_hydro_2_C | 6.83e-130 | 274 | 593 | 1 | 302 | Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. |
| pfam02837 | Glyco_hydro_2_N | 3.69e-58 | 12 | 180 | 1 | 169 | Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction. |
| PRK10340 | ebgA | 1.51e-44 | 69 | 439 | 113 | 470 | cryptic beta-D-galactosidase subunit alpha; Reviewed |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AOI33254.1 | 0.0 | 1 | 603 | 1 | 603 |
| QPO89396.1 | 0.0 | 1 | 603 | 1 | 603 |
| QAT72873.1 | 0.0 | 1 | 603 | 1 | 603 |
| QND12330.1 | 0.0 | 1 | 603 | 1 | 603 |
| QBQ67923.1 | 0.0 | 1 | 603 | 1 | 603 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6LEJ_A | 0.0 | 1 | 600 | 4 | 603 | ChainA, Beta-D-glucuronidase [Escherichia coli] |
| 6LEM_B | 0.0 | 3 | 600 | 1 | 598 | ChainB, Beta-D-glucuronidase [Escherichia coli] |
| 6LEJ_B | 0.0 | 1 | 600 | 1 | 600 | ChainB, Beta-D-glucuronidase [Escherichia coli] |
| 3K46_A | 0.0 | 1 | 600 | 3 | 602 | Crystalstructure of full-length E. coli beta-glucuronidase [Escherichia coli K-12],3K46_B Crystal structure of full-length E. coli beta-glucuronidase [Escherichia coli K-12],3K4D_A Crystal structure of E. coli beta-glucuronidase with the glucaro-d-lactam inhibitor bound [Escherichia coli K-12],3K4D_B Crystal structure of E. coli beta-glucuronidase with the glucaro-d-lactam inhibitor bound [Escherichia coli K-12],6LEM_A Chain A, Beta-D-glucuronidase [Escherichia coli] |
| 6LEG_A | 0.0 | 1 | 600 | 2 | 601 | ChainA, Beta-D-glucuronidase [Escherichia coli],6LEG_B Chain B, Beta-D-glucuronidase [Escherichia coli],6LEG_C Chain C, Beta-D-glucuronidase [Escherichia coli],6LEG_D Chain D, Beta-D-glucuronidase [Escherichia coli],6LEL_A Chain A, Beta-D-glucuronidase [Escherichia coli],6LEL_B Chain B, Beta-D-glucuronidase [Escherichia coli] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P05804 | 0.0 | 1 | 600 | 1 | 600 | Beta-glucuronidase OS=Escherichia coli (strain K12) OX=83333 GN=uidA PE=1 SV=2 |
| Q5R5N6 | 9.68e-168 | 1 | 592 | 27 | 630 | Beta-glucuronidase OS=Pongo abelii OX=9601 GN=GUSB PE=2 SV=2 |
| P08236 | 1.37e-167 | 1 | 592 | 27 | 630 | Beta-glucuronidase OS=Homo sapiens OX=9606 GN=GUSB PE=1 SV=2 |
| O77695 | 1.76e-167 | 1 | 592 | 24 | 627 | Beta-glucuronidase (Fragment) OS=Chlorocebus aethiops OX=9534 GN=GUSB PE=2 SV=1 |
| Q4FAT7 | 7.99e-167 | 1 | 592 | 28 | 630 | Beta-glucuronidase OS=Sus scrofa OX=9823 GN=GUSB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000047 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |