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CAZyme Information: MGYG000002534_00113
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Citrobacter_A farmeri | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter_A; Citrobacter_A farmeri | |||||||||||
| CAZyme ID | MGYG000002534_00113 | |||||||||||
| CAZy Family | GT73 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 116598; End: 117452 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT73 | 18 | 256 | 2e-93 | 0.9877551020408163 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK09822 | PRK09822 | 9.21e-144 | 1 | 268 | 1 | 268 | lipopolysaccharide core biosynthesis protein; Provisional |
| TIGR04437 | WaaZ_KDO_III | 8.32e-142 | 6 | 256 | 1 | 251 | Kdo-III transferase WaaZ. Members of this family are WaaZ, or Kdo-III transferase. This enzyme, present in some strains of E. coli and its allies but not others, performs a non-stoichiometric addition of a third 3-deoxy-D-manno-oct-2-ulosonic acid (KDO-III) onto some fraction of KDO-II in the lipopolysaccharide (LPS) inner core. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides] |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AST77686.1 | 3.74e-206 | 1 | 284 | 1 | 284 |
| QZE44925.1 | 1.03e-203 | 1 | 284 | 1 | 284 |
| AKE60609.1 | 7.78e-199 | 1 | 284 | 1 | 284 |
| QFS69388.1 | 2.23e-198 | 1 | 284 | 1 | 284 |
| AMG92626.1 | 7.99e-192 | 1 | 284 | 1 | 284 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P27241 | 2.50e-124 | 1 | 265 | 1 | 265 | Lipopolysaccharide core biosynthesis protein RfaZ OS=Escherichia coli (strain K12) OX=83333 GN=rfaZ PE=4 SV=2 |
| P26473 | 1.02e-122 | 1 | 259 | 1 | 259 | Lipopolysaccharide core biosynthesis protein RfaZ OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=rfaZ PE=4 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000063 | 0.000002 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |